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1. cellar cellar Public

   Interactive software tool for the assignment of cell types in single-cell studies.

   Python 31 5

2. grinch grinch Public

   A library for differential expression and gene set enrichment analysis based on hydra and pydantic.

   Python 3

3. Truffle Truffle Public

   Trajectory Inference of clinical data via Multi-commodity Flow

   Jupyter Notebook 4 1

4. phenotype-cover phenotype-cover Public

   A package for biomarker selection based on multiset multicover and the cross-entropy-method.

   Python 3

5. multiset-multicover multiset-multicover Public

   Multiset multicover using the extended greedy cover algorithm implemented in C++ and exposed to Python.

   C++ 5

6. ConstrainedKMeans ConstrainedKMeans Public

   Constrained KMeans algorithm.

   Python 7