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DEPENDENCIES.md

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The following is a list of software used in distant reader and a generic short form MLA citation of its main website:

- Wget, https://www.gnu.org/software/wget/, GPLv3
- Gnu.Org. www.gnu.org, https://www.gnu.org/software/wget/. Accessed 8 Apr. 2020.

- Tika, https://tika.apache.org, Apache
Apache Tika – Apache Tika. https://tika.apache.org/. Accessed 8 Apr. 2020.
 - Spacy, https://spacy.io/, MIT
 - SpaCy · Industrial-Strength Natural Language Processing in Python. spacy.io, https://spacy.io/. Accessed 8 Apr. 2020.
- Gensim, https://radimrehurek.com/gensim/, LGPL
- Gensim: Topic Modelling for Humans. radimrehurek.com, https://radimrehurek.com/gensim/. Accessed 8 Apr. 2020.
- Textacy, https://github.com/chartbeat-labs/textacy, Apache 2
- Textacy: NLP, before and after SpaCy — Textacy 0.10.0 Documentation. https://chartbeat-labs.github.io/textacy/build/html/index.html. Accessed 8 Apr. 2020.
- SQLite, https://www.sqlite.org/index.html, Public Domain
- SQLite Home Page. https://www.sqlite.org/index.html. Accessed 8 Apr. 2020.
- OpenStack, https://www.openstack.org/, Apache 2
- “Build the Future of Open Infrastructure.” OpenStack. www.openstack.org, https://www.openstack.org/. Accessed 8 Apr. 2020.
- Slurm, https://slurm.schedmd.com/, GPL v2
- Slurm Workload Manager - Documentation. https://slurm.schedmd.com/. Accessed 8 Apr. 2020.
- Airivata, https://airavata.apache.org/, Apache 2
- Apache Airavata. https://airavata.apache.org/. Accessed 8 Apr. 2020.
- sqlalchemy, https://www.sqlalchemy.org/, MIT
- SQLAlchemy - The Database Toolkit for Python. https://www.sqlalchemy.org/. Accessed 8 Apr. 2020.
- pandas, https://pandas.pydata.org/, New BSD
- Pandas - Python Data Analysis Library. https://pandas.pydata.org/. Accessed 8 Apr. 2020.
- wordcloud, https://github.com/amueller/word_cloud, MIT
- Mueller, Andreas. Amueller/Word_cloud. 2012. 2020. GitHub, https://github.com/amueller/word_cloud.
- sklearn, https://scikit-learn.org/, BSD 3
- Scikit-Learn: Machine Learning in Python — Scikit-Learn 0.22.2 Documentation. https://scikit-learn.org/stable/. Accessed 8 Apr. 2020.
- networkx, https://networkx.github.io/, BSD 3
- NetworkX — NetworkX. https://networkx.github.io/. Accessed 8 Apr. 2020.
- textatistic, http://www.erinhengel.com/software/textatistic/, Apache 2
- Erin Hengel. http://www.erinhengel.com/software/textatistic/. Accessed 8 Apr. 2020.
- nltk, https://www.nltk.org/, Apache 2
- Natural Language Toolkit — NLTK 3.5b1 Documentation. https://www.nltk.org/. Accessed 8 Apr. 2020.
- mpl_toolkits, https://matplotlib.org/mpl_toolkits/index.html, Matplotlib license
- Toolkits — Matplotlib 2.2.2 Documentation. https://matplotlib.org/mpl_toolkits/index.html. Accessed 8 Apr. 2020.
- DBI, https://metacpan.org/pod/DBI, Perl 5
- DBI - Database Independent Interface for Perl - Metacpan.Org. https://metacpan.org/pod/DBI. Accessed 8 Apr. 2020.
- JSON, https://metacpan.org/pod/JSON, Perl 5
- JSON - JSON (JavaScript Object Notation) Encoder/Decoder - Metacpan.Org. https://metacpan.org/pod/JSON. Accessed 8 Apr. 2020.
- Archive::Zip, https://metacpan.org/pod/Archive::Zip, Perl 5
- Archive::Zip - Provide an Interface to ZIP Archive Files. - Metacpan.Org. https://metacpan.org/pod/Archive::Zip. Accessed 8 Apr. 2020.
- WebService::Solr, https://metacpan.org/pod/WebService::Solr, Perl 5
- WebService::Solr - Module to Interface with the Solr (Lucene) Webservice - Metacpan.Org. https://metacpan.org/pod/WebService::Solr. Accessed 8 Apr. 2020.
- XML::XPath, https://metacpan.org/pod/XML::XPath, Artistic 2
- XML::XPath - Parse and Evaluate XPath Statements. - Metacpan.Org. https://metacpan.org/pod/XML::XPath. Accessed 8 Apr. 2020.
- CGI, https://metacpan.org/pod/distribution/CGI/lib/CGI.pod, Artistic 2
- CGI - Handle Common Gateway Interface Requests and Responses - Metacpan.Org. https://metacpan.org/pod/distribution/CGI/lib/CGI.pod. Accessed 8 Apr. 2020.
- File::Basename, https://metacpan.org/pod/File::Basename, Perl 5
- File::Basename - Parse File Paths into Directory, Filename and Suffix. - Metacpan.Org. https://metacpan.org/pod/File::Basename. Accessed 8 Apr. 2020.
- File::Copy, https://metacpan.org/pod/File::Copy, Perl 5
- File::Copy - Copy Files or Filehandles - Metacpan.Org. https://metacpan.org/pod/File::Copy. Accessed 8 Apr. 2020.
- HTML::Entities, https://metacpan.org/pod/HTML::Entities, Perl 5
- HTML::Entities - Encode or Decode Strings with HTML Entities - Metacpan.Org. https://metacpan.org/pod/HTML::Entities. Accessed 8 Apr. 2020.
- HTML::Escape, https://metacpan.org/pod/HTML::Escape, Perl 5
- HTML::Escape - Extremely Fast HTML Escaping - Metacpan.Org. https://metacpan.org/pod/HTML::Escape. Accessed 8 Apr. 2020.
- bootstrap, https://getbootstrap.com/, MIT
- contributors, Mark Otto, Jacob Thornton, and Bootstrap. Bootstrap. getbootstrap.com, https://getbootstrap.com/. Accessed 8 Apr. 2020.
- jquery, https://jquery.com/, MIT
- js.foundation, JS Foundation-. JQuery. jquery.com, https://jquery.com/. Accessed 8 Apr. 2020.
- csvstack, http://csvkit.rtfd.org/, MIT
- Csvkit 1.0.5 — Csvkit 1.0.5 Documentation. https://csvkit.readthedocs.io/en/latest/. Accessed 8 Apr. 2020.