Data

• drug_disease_overview.tsv: Overview of drug and diseases present in any of the two KGs as well as transcritpomics data.
• gold-standard: Drug-disease pairs investigated in clinical trials.
• img: logo
• kg: KGs used in the paper.
• manual_drug_disease_mapping.tsv: Mappings across terminologies for drug and diseases used.
• transcriptomics: Harmonized transcriptomics datasets.

Folder strcture

data
|-- README.md
|-- drug_disease_overview.tsv
|-- gold-standard
|   |-- clinical-trial.json
|-- img
|   |-- logo.jpg
|-- kg
|   |-- custom_filtered_kg.tsv
|   |-- openbiolink_filtered_kg.tsv
|-- manual_drug_disease_mapping.tsv
`-- transcriptomics
    |-- creed_harmonized_expression.json
    |-- geo_harmonized_expression.json
    |-- lc1000_harmonized_expression.json
    |-- target_harmonized_expression.json