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ChangeLog.md

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Version 0.5.0

  • Added caching using LRU cache for much better request pattern. Set chunkSize in config to set request window sizes

Version 0.4.0

  • Add track type that ignores null values, fixes issues with View details popup failing to appear

Version 0.3.0

  • Name the specialized queries implemented in 0.2.0 in new category in the test data directory
  • Add Name store to query myvariant.info for variants using the searchbar in JBrowse with demo in test data directory

Version 0.2.0

  • Add ability to query some indexed start/end coordinates for specific databases
  • New query format query?q=evs.chrom:[{refseq} TO {refseq}] AND evs.hg19.start:<={end} AND evs.hg19.end:>={start}&size=1000&email=colin.diesh@gmail.com&fields=evs
  • Old query format query?q={refseq}:{start}-{end} AND exists:gwassnps&size=1000&email=colin.diesh@gmail.com&fields=gwassnps
  • Note: not all database annotations have the new format, but those that are available have been setup in test/trackList.json

Version 0.1.0

  • Added ability to get variants from myvariant.info and genes from mygene.info
  • Uses scrolling query if there are a large number of variant in a region
  • Adds a diamond glyph for nice rendering
  • Parses all information from the different databases to display in View details popup
  • Adds a test dataset