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Python packages

  • rust-graph: Dijkstra algorithm written in rust
  • bio-data-to-db: Uniprot DB parser written in rust, with additional DB helper functions
  • slack-helpers: Send experiment results to slack with ease
  • biotest: Compare PDB files, allowing small precision error

Project management

  • python-project-template-2024: All good practices in python packaging in one repo.
  • workflows: GitHub Actions reusable workflows and composite actions, plus some python project helper tools projector

Binary as a python package

Pure binary releases

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  1. mt-dti mt-dti Public

    An official Molecule Transformer Drug Target Interaction (MT-DTI) model

    Python 34 20

  2. MT-ENet MT-ENet Public

    Repository for "Improving evidential deep learning via multi-task learning," published in AAAI2022

    Python 19 2

  3. cmg cmg Public

    Controlled Molecule Generator for for Optimizing Multiple Chemical Properties

    Python 7 4

  4. Pocket2Mol_RL_public Pocket2Mol_RL_public Public

    Public repository of the paper <Fine-tuning Pocket-conditioned 3D Molecule Generation via Reinforcment Learning>

    Python 7 3

  5. DearWXpub DearWXpub Public

    a neural network-based feature selection algorithm for next-generation sequencing data

    R 6 5

  6. react-clustergrammer react-clustergrammer Public

    React component for clustergrammer

    JavaScript 6 6

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