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@datasnakes

Datasnakes

Snaking through difficult Bioinformatics questions in order to provide reproducible results and reusable software.

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  1. OrthoEvolution OrthoEvolution Public

    An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. đŸ”

    Python 28 4

  2. beRi beRi Public

    beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R

    Python 14

  3. renv renv Public

    Creating virtual environments for R.

    Python 17

  4. awesome-reproducible-R awesome-reproducible-R Public

    An awesome list of resources for reproducible research in R. Includes a table of comparison for different tools.

    R 13

  5. rinse rinse Public

    A configurable installer CLI for installing R from source (sudo and non-sudo).

    Python 5 1

  6. htseq-count-cluster htseq-count-cluster Public

    A cli for running multiple qsub jobs with HTSeq's htseq-count on a cluster.

    Python 4

Repositories

Showing 10 of 41 repositories
  • RNASeek Public

    A shiny app to perform single and multifactor differential analysis using DESeq2, edgeR, and limma

    datasnakes/RNASeek’s past year of commit activity
    HTML 2 0 4 0 Updated Apr 9, 2025
  • awesome-reproducible-R Public

    An awesome list of resources for reproducible research in R. Includes a table of comparison for different tools.

    datasnakes/awesome-reproducible-R’s past year of commit activity
    R 13 Unlicense 0 1 (1 issue needs help) 0 Updated Dec 21, 2024
  • OrthoEvolution Public

    An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. đŸ”

    datasnakes/OrthoEvolution’s past year of commit activity
    Python 28 4 17 18 Updated Dec 8, 2024
  • rinse Public

    A configurable installer CLI for installing R from source (sudo and non-sudo).

    datasnakes/rinse’s past year of commit activity
    Python 5 MIT 1 12 4 Updated Jul 17, 2023
  • pyDAVID Public

    A python3 wrapper around the DAVID API

    datasnakes/pyDAVID’s past year of commit activity
    Python 1 MIT 0 3 0 Updated Dec 16, 2022
  • github-readme-templates Public

    Easy to use README templates for a python project or python module

    datasnakes/github-readme-templates’s past year of commit activity
    4 4 0 0 Updated Aug 2, 2022
  • htseq-count-cluster Public

    A cli for running multiple qsub jobs with HTSeq's htseq-count on a cluster.

    datasnakes/htseq-count-cluster’s past year of commit activity
    Python 4 MIT 0 5 (1 issue needs help) 0 Updated Feb 25, 2022
  • datasnakes.github.io Public

    This is the website for the Datasnakes.

    datasnakes/datasnakes.github.io’s past year of commit activity
    JavaScript 1 1 2 0 Updated Feb 24, 2022
  • snakemold Public
    datasnakes/snakemold’s past year of commit activity
    Python 0 MIT 0 1 0 Updated Jul 15, 2020
  • snakeutils Public

    A collection of tools used by the Datasnakes in their various github projects.

    datasnakes/snakeutils’s past year of commit activity
    Python 0 MIT 0 3 0 Updated Jul 15, 2020
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