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@Remi-Gau Remi-Gau commented Feb 11, 2022

This can be used to denoise data to regress out confounds and keep the denoised data in the residuals.

  • make it possible to run the GLM with no condition
  • allow to keep residuals even when no GLM QA is requested
  • regenerate 4D time series from residuals.

@CerenB This may be of interest for you

If we want to go more fancy: https://github.com/cvnlab/GLMdenoise

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codecov bot commented Feb 11, 2022

Codecov Report

Merging #520 (dbbbfda) into dev (39bb165) will increase coverage by 0.05%.
The diff coverage is 76.47%.

Impacted file tree graph

@@            Coverage Diff             @@
##              dev     #520      +/-   ##
==========================================
+ Coverage   71.79%   71.84%   +0.05%     
==========================================
  Files         193      193              
  Lines        4130     4142      +12     
==========================================
+ Hits         2965     2976      +11     
- Misses       1165     1166       +1     
Flag Coverage Δ
unittests 71.84% <76.47%> (+0.05%) ⬆️

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Impacted Files Coverage Δ
src/workflows/stats/bidsFFX.m 75.00% <0.00%> (-1.28%) ⬇️
src/IO/onsetsMatToTsv.m 94.73% <50.00%> (-5.27%) ⬇️
src/subject_level/convertOnsetTsvToMat.m 98.21% <80.00%> (-1.79%) ⬇️
src/batches/stats/setBatchEstimateModel.m 100.00% <100.00%> (ø)
src/bids_model/getVariablesToConvolve.m 90.90% <100.00%> (+20.90%) ⬆️
src/defaults/checkOptions.m 90.69% <100.00%> (+0.10%) ⬆️
src/subject_level/getEventsData.m 94.73% <100.00%> (+0.61%) ⬆️

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@Remi-Gau Remi-Gau merged commit bd79166 into cpp-lln-lab:dev Feb 12, 2022
@Remi-Gau Remi-Gau deleted the GLM_no_conditions branch February 16, 2022 06:31
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