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[ENH] ROI tSNR pipeline #401

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merged 15 commits into from
Sep 2, 2021

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Remi-Gau
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@Remi-Gau Remi-Gau changed the base branch from master to fmriprep_input August 30, 2021 16:41
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Remi-Gau commented Sep 1, 2021

@mwmaclean I have fixed some of the issues and cleaned up the code.

So now things "should" run fine to preprocess the relevant data and create some ROIs and inverse normalize them in native space.

Each acquisition type will be processed independently and might take some time because brain segmentation has to happen every time which is not necessary but this is a known issue (see #398 for example) and that should be tackled in a different PR.

When things can run on your side with this, then we'll merge.

@Remi-Gau Remi-Gau merged commit 0a0375c into cpp-lln-lab:fmriprep_input Sep 2, 2021
@Remi-Gau Remi-Gau linked an issue Sep 2, 2021 that may be closed by this pull request
@Remi-Gau Remi-Gau deleted the roi_tsnr_pipeline branch September 13, 2021 19:23
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Parallel Computing Toolbox bug
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