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[DATALAD RUNCMD] Re-Running pipeline via datalad after I pointed to refactored NF
=== Do not change lines below === { "chain": [], "cmd": "( export DATA_PATH=$PWD/sourcedata/nwb/ RESULTS_PATH=$PWD HF_HUB_DOWNLOAD_TIMEOUT=300 HF_HOME=yarikcustom HF_HUB_CACHE=onemore; duct apptainer exec -B /run/docker.sock -B work/nextflow:/.nextflow ../nextflow_6eea2b1a2159.sif nextflow -C code/aind-ephys-pipeline/pipeline/nextflow_local.config -log $RESULTS_PATH/logs/nextflow.log run $PWD/code/aind-ephys-pipeline/pipeline/main_multi_backend.nf -process.echo --n_jobs 8 --job_dispatch_args \"--input nwb\" --nwb_ecephys_args \"--backend hdf5\" ; )", "dsid": "7588a064-77fd-4a64-b8bc-f4fffd9c6dc9", "exit": 0, "extra_inputs": [], "inputs": [], "outputs": [], "pwd": "." } ^^^ Do not change lines above ^^^
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{"command": "apptainer exec -B /run/docker.sock -B work/nextflow:/.nextflow ../nextflow_6eea2b1a2159.sif nextflow -C code/aind-ephys-pipeline/pipeline/nextflow_local.config -log /data/aind/try-aind-1/logs/nextflow.log run /data/aind/try-aind-1/code/aind-ephys-pipeline/pipeline/main_multi_backend.nf -process.echo --n_jobs 8 --job_dispatch_args --input nwb --nwb_ecephys_args --backend hdf5", "system": {"cpu_total": 32, "memory_total": 1081807437824, "hostname": "typhon", "uid": 47521, "user": "yoh"}, "env": {}, "gpu": [{"index": "0", "name": "NVIDIA A100-PCIE-40GB", "bus_id": "00000000:31:00.0", "driver_version": "580.82.07", "memory.total": "40960 MiB", "compute_mode": "Default"}], "duct_version": "0.11.0", "schema_version": "0.2.0", "execution_summary": {"exit_code": 0, "command": "apptainer exec -B /run/docker.sock -B work/nextflow:/.nextflow ../nextflow_6eea2b1a2159.sif nextflow -C code/aind-ephys-pipeline/pipeline/nextflow_local.config -log /data/aind/try-aind-1/logs/nextflow.log run /data/aind/try-aind-1/code/aind-ephys-pipeline/pipeline/main_multi_backend.nf -process.echo --n_jobs 8 --job_dispatch_args --input nwb --nwb_ecephys_args --backend hdf5", "logs_prefix": ".duct/logs/2025.11.13T12.50.32-2681984_", "wall_clock_time": 163.84868574142456, "peak_rss": 697356288, "average_rss": 596346609.5094341, "peak_vsz": 45181743104, "average_vsz": 43022793154.8176, "peak_pmem": 0.0, "average_pmem": 0.0, "peak_pcpu": 413.70000000000005, "average_pcpu": 69.18805031446544, "num_samples": 159, "num_reports": 4, "start_time": 1763056232.3383183, "end_time": 1763056396.187004}, "output_paths": {"stdout": ".duct/logs/2025.11.13T12.50.32-2681984_stdout", "stderr": ".duct/logs/2025.11.13T12.50.32-2681984_stderr", "usage": ".duct/logs/2025.11.13T12.50.32-2681984_usage.json", "info": ".duct/logs/2025.11.13T12.50.32-2681984_info.json", "prefix": ".duct/logs/2025.11.13T12.50.32-2681984_"}}

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