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Issues list

if the user's tmp drive is full, provide a better error message enhancement good first issue help wanted
#1899 opened Sep 5, 2023 by mr-c
Provenance capture of all information in input yaml file enhancement
#1889 opened Aug 17, 2023 by jjkoehorst
@mr-c
Download progress from input files through yaml enhancement good first issue
#1886 opened Aug 17, 2023 by jjkoehorst
add "cwltool:outdir" support for input YAML enhancement good first issue
#1837 opened May 9, 2023 by mr-c
Inconsistent location and name for renamed output of type File when also included in output of type Directory for CLT enhancement help wanted
#1628 opened Feb 21, 2022 by jotasi
5
add --beta-pip-dependencies enhancement gsoc help wanted
#1492 opened Aug 25, 2021 by mr-c
1
document troubleshooting techniques enhancement help wanted
#1434 opened Apr 8, 2021 by srp33
3
Feature request: S3 file access enhancement help wanted
#1388 opened Dec 10, 2020 by stevekm
5
exit code 34 for validation errors enhancement good first issue help wanted
#1365 opened Nov 10, 2020 by mr-c
better error message for outputSource extra element enhancement help wanted
#1357 opened Oct 23, 2020 by mr-c
Document podman compatability enhancement help wanted
#1344 opened Sep 29, 2020 by mr-c
2
CWL parameter references: detect attempts to use parameters not in the current namespace and suggest a fix enhancement gsoc help wanted
#1338 opened Aug 21, 2020 by mr-c
Fuzzing cwltool enhancement gsoc
#1170 opened Aug 14, 2019 by mr-c
4 tasks
14
limit CPUs available to $(runtime.cores) when using Singularity/Apptainer engines enhancement good first issue help wanted
#984 opened Nov 23, 2018 by mr-c
2 tasks done
1
Tasks for CWLProv enhancement TODO
#807 opened Jul 3, 2018 by FarahZKhan
8 of 17 tasks
@stain @mr-c @FarahZKhan
1
Workflow factory does not resolve path to location enhancement good first issue help wanted
#778 opened May 29, 2018 by jirikuncar
providing a string for an input with type File needs a better error message enhancement good first issue help wanted
#758 opened May 18, 2018 by mr-c
4
Named pipes should be used for inputs and outputs that both have the property streamable enhancement help wanted
#644 opened Feb 5, 2018 by ThomasHickman unplanned
7
--validate should also validate input objects enhancement gsoc help wanted
#606 opened Jan 12, 2018 by mr-c
static checker should check secondaryFiles enhancement
#602 opened Jan 9, 2018 by tetron
refactor logging? enhancement
#591 opened Jan 2, 2018 by mr-c
enforce pydocstyle on changed/new code enhancement
#585 opened Dec 18, 2017 by mr-c
Improve experience using cwltool.factory enhancement
#567 opened Nov 15, 2017 by mr-c
1 of 2 tasks
accept globs using the CLI interface for inputs that are File[] or Directory enhancement good first issue gsoc help wanted
#448 opened Jun 29, 2017 by mr-c
2
enable use inside Jupyter notebooks enhancement
#221 opened Nov 8, 2016 by mr-c
2
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