Generate parser from cwltool extensions (#337)

Author: GlassOfWhiskey

MANIFEST.in

@@ -21,6 +21,7 @@ include testdata/workflows/*.cwl
 include testdata/workflows/*.yaml
 include testdata/types/*.yml
 include testdata/checker_wf/*.cwl
+include testdata/extensions/*.cwl
 include cwl_utils/py.typed
 include docs/conf.py docs/Makefile docs/_static/favicon.ico docs/requirements.txt
 include docs/*.rst

Makefile

@@ -191,19 +191,19 @@ flake8: $(PYSOURCES)
 cwl_utils/parser/cwl_v1_0.py: FORCE
 	schema-salad-tool --codegen python \
 		--codegen-parser-info "org.w3id.cwl.v1_0" \
-		https://github.com/common-workflow-language/common-workflow-language/raw/codegen/v1.0/CommonWorkflowLanguage.yml \
+		https://github.com/common-workflow-language/common-workflow-language/raw/codegen/v1.0/extensions.yml \
 		> $@
 
 cwl_utils/parser/cwl_v1_1.py: FORCE
 	schema-salad-tool --codegen python \
 		--codegen-parser-info "org.w3id.cwl.v1_1" \
-		https://github.com/common-workflow-language/cwl-v1.1/raw/codegen/CommonWorkflowLanguage.yml \
+		https://github.com/common-workflow-language/cwl-v1.1/raw/codegen/extensions.yml \
 		> $@
 
 cwl_utils/parser/cwl_v1_2.py: FORCE
 	schema-salad-tool --codegen python \
 		--codegen-parser-info "org.w3id.cwl.v1_2" \
-		https://github.com/common-workflow-language/cwl-v1.2/raw/codegen/CommonWorkflowLanguage.yml \
+		https://github.com/common-workflow-language/cwl-v1.2/raw/codegen/extensions.yml \
 		> $@
 
 regen_parsers: cwl_utils/parser/cwl_v1_*.py

README.rst

@@ -152,13 +152,13 @@ Regenerate parsers
 To regenerate install the ``schema_salad`` package and run:
 
 ``cwl_utils/parser/cwl_v1_0.py`` was created via
-``schema-salad-tool --codegen python https://github.com/common-workflow-language/common-workflow-language/raw/codegen/v1.0/CommonWorkflowLanguage.yml --codegen-parser-info "org.w3id.cwl.v1_0" > cwl_utils/parser/cwl_v1_0.py``
+``schema-salad-tool --codegen python https://github.com/common-workflow-language/common-workflow-language/raw/codegen/v1.0/extensions.yml --codegen-parser-info "org.w3id.cwl.v1_0" > cwl_utils/parser/cwl_v1_0.py``
 
 ``cwl_utils/parser/cwl_v1_1.py`` was created via
-``schema-salad-tool --codegen python https://github.com/common-workflow-language/cwl-v1.1/raw/codegen/CommonWorkflowLanguage.yml --codegen-parser-info "org.w3id.cwl.v1_1" > cwl_utils/parser/cwl_v1_1.py``
+``schema-salad-tool --codegen python https://github.com/common-workflow-language/cwl-v1.1/raw/codegen/extensions.yml --codegen-parser-info "org.w3id.cwl.v1_1" > cwl_utils/parser/cwl_v1_1.py``
 
 ``cwl_utils/parser/cwl_v1_2.py`` was created via
-``schema-salad-tool --codegen python https://github.com/common-workflow-language/cwl-v1.2/raw/1.2.1_proposed/CommonWorkflowLanguage.yml --codegen-parser-info "org.w3id.cwl.v1_2" > cwl_utils/parser/cwl_v1_2.py``
+``schema-salad-tool --codegen python https://github.com/common-workflow-language/cwl-v1.2/raw/codegen/extensions.yml --codegen-parser-info "org.w3id.cwl.v1_2" > cwl_utils/parser/cwl_v1_2.py``
 
 Release
 ~~~~~~~