pyproject.toml

[build-system]
requires = ["setuptools>=61.2"]
build-backend = "setuptools.build_meta"

[project]
name = "cwl-utils"
authors = [{name = "Common Workflow Language project contributors", email = "common-workflow-language@googlegroups.com"}]
license = {text = "Apache 2.0"}
keywords = ["cwl", "commonwl", "common-workflow-language", "sciworkflows"]
readme = "README.rst"
classifiers = [
    "Development Status :: 4 - Beta",
    "Environment :: Console",
    "Intended Audience :: Developers",
    "License :: OSI Approved :: Apache Software License",
    "Operating System :: POSIX",
    "Operating System :: MacOS :: MacOS X",
    "Programming Language :: Python",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "Topic :: File Formats",
    "Topic :: Scientific/Engineering",
    "Topic :: Scientific/Engineering :: Information Analysis",
    "Topic :: Software Development :: Libraries",
    "Topic :: System :: Distributed Computing",
    "Typing :: Typed",
]
requires-python = ">=3.9,<3.14"
dynamic = ["version", "dependencies"]

[project.urls]
Documentation = "https://cwl-utils.readthedocs.io/"
Homepage = "https://www.commonwl.org"
Repository = "https://github.com/common-workflow-language/cwl-utils"
Issues = "https://github.com/common-workflow-language/cwl-utils/issues"
Changelog = "https://github.com/common-workflow-language/cwl-utils/releases"
"Related Tools" = "https://www.commonwl.org/tools/"

[project.optional-dependencies]
pretty = ["cwlformat"]
testing = [
    "pytest<9",
    "pytest-mock",
]

[project.scripts]
cwl-cite-extract = "cwl_utils.cite_extract:main"
cwl-docker-extract = "cwl_utils.docker_extract:main"
cwl-expression-refactor = "cwl_utils.expression_refactor:main"
cwl-graph-split = "cwl_utils.graph_split:main"
cwl-normalizer = "cwl_utils.normalizer:main"
cwl-inputs-schema-gen = "cwl_utils.inputs_schema_gen:main"

[tool.aliases]
test = "pytest"

[tool.pytest.ini_options]
testpaths = ["tests"]

[tool.setuptools]
packages = [
    "cwl_utils",
    "cwl_utils.parser",
    "cwl_utils.tests",
    "cwl_utils.testdata",
    "cwl_utils.testdata.checker_wf",
    "cwl_utils.testdata.extensions",
    "cwl_utils.testdata.types",
    "cwl_utils.testdata.workflows",
]
include-package-data = true

[tool.setuptools.package-dir]
"cwl_utils.parser" = "cwl_utils/parser"
"cwl_utils.tests" = "tests"
"cwl_utils.testdata" = "testdata"
"cwl_utils.testdata.checker_wf" = "testdata/checker_wf"
"cwl_utils.testdata.extensions" = "testdata/extensions"
"cwl_utils.testdata.types" = "testdata/types"
"cwl_utils.testdata.workflows" = "testdata/workflows"

[tool.setuptools.package-data]
"cwl_utils" = ["templates/*.json"]

[tool.setuptools.dynamic]
version = {attr = "cwl_utils.__meta__.__version__"}
dependencies = {file = ["requirements.txt"]}

[tool.isort]
profile = "black"

[tool.ruff.lint]
select = [
  "D",   # pydocstyle
]
ignore = [
  "D100",
  "D101",
  "D102",
  "D103",
  "D104",
  "D105",
  "D107",
  "D203",
  "D212",
]