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collaborativebioinformatics

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  3. Sniphles Sniphles Public

    Sniphles is a read-based phasing approach for phased variant calling of structural variants.

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Repositories

Showing 10 of 128 repositories
  • RAIDers Public

    RAIDers

    collaborativebioinformatics/RAIDers’s past year of commit activity
    Jupyter Notebook 5 MIT 2 0 0 Updated Feb 9, 2026
  • OncoLearn Public

    Cancer Biomarker Discovery

    collaborativebioinformatics/OncoLearn’s past year of commit activity
    Jupyter Notebook 7 MIT 4 5 (2 issues need help) 1 Updated Jan 26, 2026
  • FedGen Public

    Federated Learning (FL) Infrastructure & Synthetic Data

    collaborativebioinformatics/FedGen’s past year of commit activity
    Python 7 MIT 2 5 1 Updated Jan 23, 2026
  • Haploblock_Clusters_ElixirBH25 Public Forked from jedrzejkubica/Elixir-BH-2025

    Elixir BioHackathon 2025 Project 4: Beyond beacons: Establishing genomic background in European and international biobanks

    collaborativebioinformatics/Haploblock_Clusters_ElixirBH25’s past year of commit activity
    Python 6 MIT 2 0 0 Updated Jan 15, 2026
  • omnigenome Public

    Pangenome & Genomic Cluster Modeling

    collaborativebioinformatics/omnigenome’s past year of commit activity
    Jupyter Notebook 5 MIT 0 0 0 Updated Jan 13, 2026
  • FedViz Public

    Visual Analytics for Cross-Site Biomedical Data and Federated Model Evaluation

    collaborativebioinformatics/FedViz’s past year of commit activity
    TypeScript 1 MIT 0 0 0 Updated Jan 10, 2026
  • MuFFLe Public

    Knowledge structures for Multimodal Models

    collaborativebioinformatics/MuFFLe’s past year of commit activity
    Jupyter Notebook 4 MIT 6 0 0 Updated Jan 9, 2026
  • PRSAggretator Public

    Polygenic Risk Aggregation in common diseases and phenotypes

    collaborativebioinformatics/PRSAggretator’s past year of commit activity
    Python 2 MIT 1 0 0 Updated Jan 9, 2026
  • FedPathHarmony Public

    FedPathHarmony: Federated Harmonization for Multi-Center Digital Pathology

    collaborativebioinformatics/FedPathHarmony’s past year of commit activity
    Python 1 MIT 4 0 0 Updated Jan 9, 2026
  • Med_SNP_Deconvolution Public

    Deconvolution of medically relevant SNPs

    collaborativebioinformatics/Med_SNP_Deconvolution’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 9, 2026
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