Releases: clEsperanto/napari_pyclesperanto_assistant
Releases · clEsperanto/napari_pyclesperanto_assistant
0.22.1
Bugfix:
- Setting voxel size of 2D images raised an error.
0.22.0
Changed menu locations
- Some menus have been moved from
Measurement
toMeasurement tables
andMeasurement maps
0.21.2
New menu entries
- Segmentation post-processing > Merge annotated touching labels
0.21.1
New menu entries (Thanks to Varun Kapoor for proposing)
Transform > Rotate
Transform > Reduce stack
Transform > Sub-stack
Transform > Scale
Transform > Translate
Transform > Rigid Transform
0.21.0
New features, added to the menu:
Tools > Filtering / background removal > Top-hat (box, clesperanto)
Tools > Filtering > Difference of Gaussian (clesperanto)
Tools > Filtering > Laplacian of Gaussian (clesperanto)
Tools > Filtering / background removal > Subtract Gaussian background (clesperanto)
Tools > Filtering / background removal > Divide by Gaussian background (clesperanto)
Tools > Filtering > Small Hessian eigenvalue (clesperanto)
Tools > Filtering > Large Hessian eigenvalue (clesperanto)
Tools > Filtering / edge enhancement > Standard deviation (box, clesperanto)
Tools > Filtering / edge enhancement > Variance (box, clesperanto)
Tools > Measurement > Extension ratio map (clesperanto)
Tools > Measurement > Pixel count map (clesperanto)
Tools > Image math> Reciprocal (clesperanto)
Tools > Image math > Absolute difference (clesperanto)
Tools > Image math > Squared difference (clesperanto)
Tools > Segmentation / labeling > Eroded-Otsu-labeling (clesperanto)
Tools > Segmentation / labeling > Gauss-Otsu-labeling (clesperanto)
Tools > Segmentation post-processing > Binary AND / intersection (clesperanto)
Tools > Segmentation post-processing > Binary not (clesperanto)
Tools > Segmentation post-processing > Binary OR / union (clesperanto)
Tools > Segmentation post-processing > Binary subtract (clesperanto)
Tools > Segmentation post-processing > Binary XOR (clesperanto)
Tools > Segmentation post-processing > Exclude large labels (clesperanto)
Tools > Segmentation post-processing > Exclude small labels (clesperanto)
Tools > Segmentation post-processing > Exclude labels with map values out of range (clesperanto)
Tools > Segmentation post-processing > Exclude labels with map values within range (clesperanto)
Tools > Segmentation post-processing > Extend labels via Voronoi (clesperanto)
Tools > Segmentation post-processing > Reduce labels to centroids (clesperanto)
Tools > Segmentation post-processing > Reduce labels to label edges (clesperanto)
Tools > Segmentation post-processing > Dilate Labels (clesperanto)
Tools > Segmentation post-processing > Erode Labels (clesperanto)
Tools > Segmentation post-processing > Opening Labels (clesperanto)
Tools > Segmentation post-processing > Closing Labels (clesperanto)
0.20.0
New features
- Compatibility with morphometrics: label_statistics now show up in morphometrics region properties widget
Backwards compatibility breaking changes:
- parameters of the label_statitstics function were renamed: "image" -> "intensity_image", "labels" -> "label_image"
0.19.0
New features
Tools > Segmentation post-processing > Merge touching labels (clesperanto)
Tools > Segmentation post-processing > Merge touching labels with intensity along borders within range (clesperanto)
Tools > Segmentation post-processing > Smooth labels (clesperanto)
See also https://github.com/clEsperanto/pyclesperanto_prototype/releases/tag/0.19.0
0.18.4
New features
Tools > Measurement > Label statistics [of all frames]
which includes neighbor statisticsFile > Open Samples > clEsperanto > Lung timelapse (100 MB)
Deprecated:
Tools > Measurement > Statistics of labelled pixels [of all frames]
Tools > Measurement > Statistics of labeled pixels including neighborhood statistics [of all frames]
0.18.3
New release to invoke a version bump on conda-forge...
0.18.2
Bug fixes
- Select GPU dialog was not working from the plugins menu (thanks to @psobolewskiPhD for reporting)