setup.py

from setuptools import setup, find_packages
import glob
import os
import pkg_resources
import pathlib

from src import __version__, _program

# glob_fix command thanks to https://stackoverflow.com/a/64789489/15793575
def glob_fix(package_name, glob):
    # this assumes setup.py lives in the folder that contains the package
    package_path = pathlib.Path(f'./{package_name}').resolve()
    return [str(path.relative_to(package_path))
            for path in package_path.glob(glob)]

setup(name='deletion_detector',
      version=__version__,
      packages=['src'],
      scripts=[],
      description='Script to detect deletions in SARS-CoV-2 genomes',
      url='https://github.com/charlesfoster/deletion_detector',
      author='Dr Charles Foster',
      author_email='charles.foster@unsw.edu.au',
      entry_points="""
      [console_scripts]
      {program} = src.command:main
      """.format(program = _program),
      include_package_data=True,
      keywords=[],
      zip_safe=False)