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Homebrew repository for CloudBioLinux: incubator for formulas to end up in homebrew-science

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README.md
README.md
 
 
age-metasv.rb
age-metasv.rb
 
 
bcbio-rnaseq.rb
bcbio-rnaseq.rb
 
 
bcbio-variation-recall.rb
bcbio-variation-recall.rb
 
 
biobambam.rb
biobambam.rb
 
 
bwakit.rb
bwakit.rb
 
 
cancerit-allelecount.rb
cancerit-allelecount.rb
 
 
caveman.rb
caveman.rb
 
 
cramtools.rb
cramtools.rb
 
 
cufflinks-binary.rb
cufflinks-binary.rb
 
 
express-binary.rb
express-binary.rb
 
 
flux-simulator.rb
flux-simulator.rb
 
 
gatk-framework.rb
gatk-framework.rb
 
 
glia.rb
glia.rb
 
 
gvcftools.rb
gvcftools.rb
 
 
hall-lab-sv-tools.rb
hall-lab-sv-tools.rb
 
 
impute2.rb
impute2.rb
 
 
isaac-aligner.rb
isaac-aligner.rb
 
 
isaac-variant-caller.rb
isaac-variant-caller.rb
 
 
libmaus.rb
libmaus.rb
 
 
lofreq.rb
lofreq.rb
 
 
manta.rb
manta.rb
 
 
metal-gwas.rb
metal-gwas.rb
 
 
oncofuse.rb
oncofuse.rb
 
 
pbgzip.rb
pbgzip.rb
 
 
pindel.rb
pindel.rb
 
 
platypus-variant.rb
platypus-variant.rb
 
 
qsignature.rb
qsignature.rb
 
 
qsnp.rb
qsnp.rb
 
 
rsem.rb
rsem.rb
 
 
rtg-tools.rb
rtg-tools.rb
 
 
s3gof3r.rb
s3gof3r.rb
 
 
sailfish-cbl.rb
sailfish-cbl.rb
 
 
sambamba-binary.rb
sambamba-binary.rb
 
 
samtools-library-0.1.rb
samtools-library-0.1.rb
 
 
scalpel.rb
scalpel.rb
 
 
seqbuster.rb
seqbuster.rb
 
 
smash.rb
smash.rb
 
 
spades-binary.rb
spades-binary.rb
 
 
speedseq.rb
speedseq.rb
 
 
staden_io_lib.rb
staden_io_lib.rb
 
 
theta2.rb
theta2.rb
 
 
tophat-binary.rb
tophat-binary.rb
 
 
vardict-java.rb
vardict-java.rb
 
 
vardict.rb
vardict.rb
 
 
vep.rb
vep.rb
 
 
vt.rb
vt.rb
 
 
wham.rb
wham.rb
 
 

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Homebrew recipes for CloudBioLinux

This repository contains Homebrew/Linuxbrew recipes for CloudBioLinux. Maintenance for the programs here has moved to the bioconda project. Feel free to use any recipes here. If anyone wants to take ownership of a particular recipe, moving them to homebrew-science ensures you can support them for long term stability.

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Homebrew repository for CloudBioLinux: incubator for formulas to end up in homebrew-science

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