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requirements.txt
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requirements.txt
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#
# This file is autogenerated by pip-compile with Python 3.10
# by the following command:
#
# pip-compile requirements.in
#
aiodns==2.0.0
# via hail
aiohttp==3.9.1
# via
# hail
# slackclient
aiosignal==1.3.1
# via aiohttp
asttokens==2.4.1
# via stack-data
async-timeout==4.0.3
# via aiohttp
asyncinit==0.2.4
# via hail
attrs==23.1.0
# via aiohttp
avro==1.11.3
# via hail
azure-common==1.1.28
# via azure-mgmt-storage
azure-core==1.29.5
# via
# azure-identity
# azure-mgmt-core
# azure-storage-blob
# msrest
azure-identity==1.15.0
# via hail
azure-mgmt-core==1.4.0
# via azure-mgmt-storage
azure-mgmt-storage==20.1.0
# via hail
azure-storage-blob==12.19.0
# via hail
bokeh==3.3.1
# via hail
boto3==1.33.1
# via hail
botocore==1.33.1
# via
# boto3
# hail
# s3transfer
cachetools==5.3.2
# via google-auth
certifi==2023.11.17
# via
# elasticsearch
# msrest
# requests
cffi==1.16.0
# via
# cryptography
# pycares
charset-normalizer==3.3.2
# via requests
click==8.1.7
# via typer
comm==0.2.0
# via ipywidgets
commonmark==0.9.1
# via rich
contourpy==1.2.0
# via bokeh
cryptography==41.0.7
# via
# azure-identity
# azure-storage-blob
# msal
# pyjwt
cython==0.29.36
# via hdbscan
decorator==4.4.2
# via
# hail
# ipython
deprecated==1.2.14
# via hail
dill==0.3.7
# via hail
docutils==0.20.1
# via python-daemon
elasticsearch==7.9.1
# via -r requirements.in
exceptiongroup==1.2.0
# via ipython
executing==2.0.1
# via stack-data
frozenlist==1.4.0
# via
# aiohttp
# aiosignal
# hail
gnomad==0.6.4
# via -r requirements.in
google-api-core==2.14.0
# via
# google-api-python-client
# google-cloud-core
# google-cloud-storage
google-api-python-client==2.108.0
# via -r requirements.in
google-auth==2.23.4
# via
# google-api-core
# google-api-python-client
# google-auth-httplib2
# google-auth-oauthlib
# google-cloud-core
# google-cloud-storage
# hail
google-auth-httplib2==0.1.1
# via google-api-python-client
google-auth-oauthlib==0.8.0
# via hail
google-cloud-core==2.3.3
# via google-cloud-storage
google-cloud-storage==2.13.0
# via hail
google-crc32c==1.5.0
# via
# google-cloud-storage
# google-resumable-media
google-resumable-media==2.6.0
# via google-cloud-storage
googleapis-common-protos==1.61.0
# via google-api-core
hail==0.2.122
# via -r requirements.in
hdbscan==0.8.33
# via gnomad
httplib2==0.22.0
# via
# google-api-python-client
# google-auth-httplib2
humanize==1.1.0
# via hail
idna==3.6
# via
# requests
# yarl
ipython==8.18.1
# via ipywidgets
ipywidgets==8.1.1
# via gnomad
isodate==0.6.1
# via
# azure-storage-blob
# msrest
janus==1.0.0
# via hail
jedi==0.19.1
# via ipython
jinja2==3.1.2
# via bokeh
jmespath==1.0.1
# via
# boto3
# botocore
joblib==1.3.2
# via
# hdbscan
# scikit-learn
jproperties==2.1.1
# via hail
jupyterlab-widgets==3.0.9
# via ipywidgets
lockfile==0.12.2
# via python-daemon
luigi==3.4.0
# via -r requirements.in
markupsafe==2.1.3
# via jinja2
matplotlib-inline==0.1.6
# via ipython
msal==1.25.0
# via
# azure-identity
# msal-extensions
msal-extensions==1.0.0
# via azure-identity
msrest==0.7.1
# via azure-mgmt-storage
multidict==6.0.4
# via
# aiohttp
# yarl
nest-asyncio==1.5.8
# via hail
numpy==1.26.2
# via
# bokeh
# contourpy
# hail
# hdbscan
# pandas
# scikit-learn
# scipy
oauthlib==3.2.2
# via requests-oauthlib
orjson==3.9.10
# via hail
packaging==23.2
# via
# bokeh
# plotly
pandas==2.1.3
# via
# bokeh
# hail
parsimonious==0.10.0
# via hail
parso==0.8.3
# via jedi
pexpect==4.9.0
# via ipython
pillow==10.1.0
# via bokeh
plotly==5.18.0
# via hail
portalocker==2.8.2
# via msal-extensions
prompt-toolkit==3.0.41
# via ipython
protobuf==3.20.2
# via
# google-api-core
# googleapis-common-protos
# hail
ptyprocess==0.7.0
# via pexpect
pure-eval==0.2.2
# via stack-data
py4j==0.10.9.5
# via pyspark
pyasn1==0.5.1
# via
# pyasn1-modules
# rsa
pyasn1-modules==0.3.0
# via google-auth
pycares==4.4.0
# via aiodns
pycparser==2.21
# via cffi
pygments==2.17.2
# via
# ipython
# rich
pyjwt[crypto]==2.8.0
# via msal
pyparsing==3.1.1
# via httplib2
pyspark==3.3.3
# via hail
python-daemon==3.0.1
# via luigi
python-dateutil==2.8.2
# via
# botocore
# luigi
# pandas
python-json-logger==2.0.7
# via hail
pytz==2023.3.post1
# via pandas
pyyaml==6.0.1
# via
# bokeh
# hail
regex==2023.10.3
# via parsimonious
requests==2.31.0
# via
# azure-core
# google-api-core
# google-cloud-storage
# hail
# msal
# msrest
# requests-oauthlib
requests-oauthlib==1.3.1
# via
# google-auth-oauthlib
# msrest
rich==12.6.0
# via hail
rsa==4.9
# via google-auth
s3transfer==0.8.0
# via boto3
scikit-learn==1.3.2
# via
# gnomad
# hdbscan
scipy==1.11.4
# via
# hail
# hdbscan
# scikit-learn
six==1.16.0
# via
# asttokens
# azure-core
# isodate
# jproperties
# python-dateutil
slackclient==2.5.0
# via gnomad
sortedcontainers==2.4.0
# via hail
stack-data==0.6.3
# via ipython
tabulate==0.9.0
# via hail
tenacity==8.2.3
# via
# luigi
# plotly
threadpoolctl==3.2.0
# via scikit-learn
tornado==6.3.3
# via
# bokeh
# luigi
traitlets==5.14.0
# via
# comm
# ipython
# ipywidgets
# matplotlib-inline
typer==0.9.0
# via hail
typing-extensions==4.8.0
# via
# azure-core
# azure-storage-blob
# janus
# typer
tzdata==2023.3
# via pandas
uritemplate==4.1.1
# via google-api-python-client
urllib3==2.0.7
# via
# botocore
# elasticsearch
# requests
uvloop==0.19.0
# via hail
wcwidth==0.2.12
# via prompt-toolkit
widgetsnbextension==4.0.9
# via ipywidgets
wrapt==1.16.0
# via deprecated
xyzservices==2023.10.1
# via bokeh
yarl==1.9.3
# via aiohttp
# The following packages are considered to be unsafe in a requirements file:
# setuptools