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1000G_EH_v1.0.tsv
We can make this file beautiful and searchable if this error is corrected: It looks like row 2 should actually have 1 column, instead of 4 in line 1.
69 lines (69 loc) · 3.77 KB
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1000G_EH_v1.0.tsv
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#loc:motif:gene:threshold mean std median
10:81586142-81586159:CGG:LOC642361/NUTM2B-AS1:700 9.0 9.0 2.0
10:95462280-95462305:CCG:FRA10AC1:>200 10.0 9.0 5.0
11:119077000-119077033:CGG:CBL2:100-1000 13.0 12.0 3.0
11:530405-531236:GGCGTCCCCTGGAGAGAAGGGCGAGTGT:HRAS:rare alleles 8.0 8.0 2.0
11:66512291-66512316:GGC:C11orf80:500 10.0 10.0 2.0
12:112036754-112036823:CTG:ATXN2:>34 22.0 22.0 1.0
12:50898787-50898807:CGG:DIP2B:156-323 9.0 7.0 5.0
12:7045880-7045938:CAG:ATN1:49-88 19.0 20.0 3.0
13:36050434-36050492:CTG:MAB21L1:>50 18.0 19.0 4.0
13:70713516-70713561:CTG:ATXN8/ATXN8OS:>110 16.0 15.0 7.0
13:100637703-100637748:GCG:ZIC2:25 16.0 16.0 1.0
14:23790681-23790711:GCG:PABPN1:12-17 10.0 10.0 0.0
14:92537355-92537396:CTG:ATXN3:>55 23.0 23.0 6.0
16:17564765-17564779:CCG:XYLT:>72-120 28.0 32.0 14.0
16:24624760-24624853:TTTCA:TNRC6A:(TTTTA)22(TTTCA)exp(TTTTA)exp > 5.6kb than control 14.0 14.0 2.0
16:24624760-24624853:TTTTA:TNRC6A:(TTTTA)22(TTTCA)exp(TTTTA)exp > 5.6kb than control 14.0 14.0 3.0
16:66524300-66524369:TAAAA:TK2/BEAN:110 21.0 18.0 12.0
16:66524300-66524369:TGGAA:TK2/BEAN:110 14.0 15.0 2.0
16:87637889-87637935:CTG:JPH3:51-57 17.0 16.0 2.0
17:78120792-78120938:GCCGCTGCCGACCTCGCTGT:EIF4A3:14-16 7.0 7.0 1.0
18:53253385-53253460:CAG:TCF4:800-2100 20.0 18.0 11.0
19:13318673-13318712:CTG:CACNA1A:20-29 12.0 12.0 2.0
19:18896845-18896859:GTC:COMP:4,6,7 5.0 5.0 0.0
19:46273463-46273524:CAG:DMPK/DMPKas:>90-6500 12.0 13.0 5.0
:GGC:NOTCH2NLC:>134 20.0 21.0 5.0
1:154842317-154842355:CTG:KCNN3:ND 13.0 13.0 1.0
1:57832716-57832797:AAAAT:DAB1:(ATTTT)60-79(ATTTC)31-75(ATTTT)58-90 16.0 15.0 8.0
1:57832716-57832797:GAAAT:DAB1:(ATTTT)60-79(ATTTC)31-75(ATTTT)58-90 15.0 15.0 3.0
20:2633379-2633426:GGGCCT:NOP56:>650 9.0 10.0 2.0
21:45196324-45196360:CGCGGGGCGGGG:CSTB:30-75 3.0 3.0 1.0
22:46191235-46191304:AATCT:ATXN10:800-4500 14.0 14.0 2.0
22:46191235-46191304:ATTCT:ATXN10:800-4500 14.0 14.0 3.0
2:100721261-100721286:GCC:AFF3:>300 11.0 9.0 6.0
2:176957786-176957827:GCG:HOXD13:22-29 14.0 14.0 0.0
2:191745599-191745646:GCA:GLS:>680 13.0 14.0 4.0
2:96862805-96862862:AAAAT:STARD7: 14.0 13.0 4.0
2:96862805-96862862:AAATG:STARD7: 13.0 13.0 3.0
3:128891416-128891541:CAGG:ZNF9/CNBP:75-11000 26.0 25.0 3.0
3:138664864-138664901:CGC:FOXL2:22-24 13.0 13.0 0.0
3:183429965-183430014:TTTCA:YEATS2: 14.0 12.0 5.0
3:183429965-183430014:TTTTA:YEATS2: 18.0 12.0 11.0
3:63898361-63898392:CAG:ATXN7:37-306 11.0 11.0 1.0
4:160263679-160263770:TTTCA:RAPGEF2:(TTTTA)exp(TTTCA)exp(TTTTa)n > 11.1kb than control 20.0 19.0 2.0
4:160263679-160263770:TTTTA:RAPGEF2:(TTTTA)exp(TTTCA)exp(TTTTa)n > 11.1kb than control 20.0 19.0 2.0
4:3076604-3076667:CAG:HTT:>35 22.0 21.0 3.0
4:39350045-39350103:AAAAG:RFC1:400-2000 24.0 12.0 19.0
4:39350045-39350103:AAGGG:RFC1:400-2000 13.0 12.0 5.0
4:41747990-41748054:CCG:PHOX2B:>24 22.0 22.0 1.0
5:10356451-10356523:TTTCA:MARCH6:>660 16.0 15.0 1.0
5:10356451-10356523:TTTTA:MARCH6:>660 16.0 15.0 2.0
5:146258291-146258322:CTG:PPP2R2B:55-78 13.0 11.0 3.0
6:16327865-16327955:CTG:ATXN1:39-81 31.0 31.0 2.0
6:170870995-170871105:CAG:TBP:47-63 35.0 36.0 2.0
6:45390487-45390531:GCG:RUNX2:27 15.0 15.0 1.0
7:103629804-103629834:GCC:RELN:12-13 12.0 12.0 2.0
7:27239545-27239585:CGC:HOXA13:24-26 14.0 13.0 2.0
7:55955294-55955332:CGG:ZNF713: 12.0 11.0 4.0
8:105601193-105601227:CCG:LRP12:138-171 13.0 12.0 3.0
8:119379052-119379157:AAAAT:SAMD12:440-3680 22.0 21.0 6.0
8:119379052-119379157:TGAAA:SAMD12:440-3680 20.0 21.0 3.0
9:27573483-27573544:CCCCGG:C9orf72:>31 12.0 10.0 3.0
9:71652203-71652220:GAA:FXN:>200 10.0 9.0 5.0
X:139586483-139586517:CGG:SOX3:>22 12.0 12.0 1.0
X:146993555-146993629:CGG:FMR1/FMR4:230-2000 35.0 35.0 5.0
X:147582125-147582273:CCG:FMR2:200-900 50.0 50.0 7.0
X:148713390-148713437:CCG:FAM11A:306-1008 21.0 18.0 5.0
X:25031771-25031814:CGC:ARX:17-23 15.0 15.0 1.0
X:66765159-66765261:CAG:AR:40-55 35.0 35.0 3.0