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base repository: broadinstitute/gnomad_methods
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compare: jg/add_functions_for_per_base_constraint
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  • 10 commits
  • 3 files changed
  • 1 contributor

Commits on Nov 28, 2024

  1. Add functions to modify the LOFTEE END_TRUNC flag

    @jkgoodrich
    jkgoodrich committed Nov 28, 2024
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Commits on Dec 2, 2024

  1. format

    @jkgoodrich
    jkgoodrich committed Dec 2, 2024
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Commits on Feb 7, 2025

  1. Merge branch 'jg/determine_end_trunc_filter_from_gerp' of https://git… 

    …hub.com/broadinstitute/gnomad_methods
    @jkgoodrich
    jkgoodrich committed Feb 7, 2025
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Commits on Mar 10, 2025

  1. Add several functions that are helpful for per base constraint

    @jkgoodrich
    jkgoodrich committed Mar 10, 2025
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Commits on Mar 12, 2025

  1. Fixes while testing

    @jkgoodrich
    jkgoodrich committed Mar 12, 2025
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  2. Allow _sum_agg_expr to take a StructExpression as input too

    @jkgoodrich
    jkgoodrich committed Mar 12, 2025
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Commits on Mar 13, 2025

  1. modify transform_grch38_methylation to handle par regions in the sa… 

    …me way as autosomes
    @jkgoodrich
    jkgoodrich committed Mar 13, 2025
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Commits on Mar 14, 2025

  1. Add mu to agg

    @jkgoodrich
    jkgoodrich committed Mar 14, 2025
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  2. Add filter to autosomes and par for coverage correction

    @jkgoodrich
    jkgoodrich committed Mar 14, 2025
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  3. Add coverage correction to the mu sum

    @jkgoodrich
    jkgoodrich committed Mar 14, 2025
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