tag:github.com,2008:https://github.com/brentp/seqcover/releases 2021-04-09T16:47:19Z tag:github.com,2008:Repository/168738466/v0.0.5 2021-04-09T16:48:46Z <h1>v0.0.5</h1> <ul> <li>handle more chrMT namings</li> <li>allow extending introns</li> <li>fix bug where sample names were converted to dates</li> </ul> brentp tag:github.com,2008:Repository/168738466/v0.0.4 2021-03-25T12:52:10Z <h1>v0.0.4</h1> <ul> <li>plot aesthetics (<a class="issue-link js-issue-link" data-error-text="Failed to load title" data-id="729905601" data-permission-text="Title is private" data-url="https://github.com/brentp/seqcover/issues/23" data-hovercard-type="issue" data-hovercard-url="/brentp/seqcover/issues/23/hovercard" href="https://github.com/brentp/seqcover/issues/23">#23</a>)</li> <li>add sub-command <code>seqcover save-transcripts</code></li> </ul> brentp tag:github.com,2008:Repository/168738466/v0.0.3 2020-10-26T20:18:44Z <p>This is the first advertised release of seqcover. There are likely to be more small bugs and missing features, but the most blatant ones have been addressed.</p> <p>Thanks to feedback from <a class="user-mention notranslate" data-hovercard-type="user" data-hovercard-url="/users/oyvindbusk/hovercard" data-octo-click="hovercard-link-click" data-octo-dimensions="link_type:self" href="https://github.com/oyvindbusk">@oyvindbusk</a>, Svetlana O, and Nicolas L.</p> <h1>v0.0.3</h1> <ul> <li>fix bug for overlapping exons (<a class="issue-link js-issue-link" data-error-text="Failed to load title" data-id="721433885" data-permission-text="Title is private" data-url="https://github.com/brentp/seqcover/issues/21" data-hovercard-type="issue" data-hovercard-url="/brentp/seqcover/issues/21/hovercard" href="https://github.com/brentp/seqcover/issues/21">#21</a>)</li> <li>prefer "22" over "22_KI270879v1_alt"</li> <li>fix bug for no exons (<a class="issue-link js-issue-link" data-error-text="Failed to load title" data-id="726204961" data-permission-text="Title is private" data-url="https://github.com/brentp/seqcover/issues/22" data-hovercard-type="issue" data-hovercard-url="/brentp/seqcover/issues/22/hovercard" href="https://github.com/brentp/seqcover/issues/22">#22</a> and thanks <a class="user-mention notranslate" data-hovercard-type="user" data-hovercard-url="/users/oyvindbusk/hovercard" data-octo-click="hovercard-link-click" data-octo-dimensions="link_type:self" href="https://github.com/oyvindbusk">@oyvindbusk</a> for reporting this and other issues)</li> <li>report e.g. "exon 1 / 6" when hovering.</li> <li>show genomic position next to gene</li> </ul> brentp tag:github.com,2008:Repository/168738466/v0.0.2 2020-10-06T19:30:25Z <p>To get started, download the binary below or via:</p> <div class="snippet-clipboard-content notranslate position-relative overflow-auto" data-snippet-clipboard-copy-content="wget https://github.com/brentp/seqcover/releases/download/v0.0.2/seqcover chmod +x ./seqcover"><pre class="notranslate"><code>wget https://github.com/brentp/seqcover/releases/download/v0.0.2/seqcover chmod +x ./seqcover </code></pre></div> <p>which will work for any modern linux system. See <a href="https://github.com/brentp/seqcover">README</a> for details on how to run.</p> brentp tag:github.com,2008:Repository/168738466/v0.0.1 2020-09-23T21:51:08Z <p>early release.</p> brentp