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BIDSapp-lify Physiopy python toolboxes #172

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Remi-Gau opened this issue Dec 14, 2022 · 0 comments
Open

BIDSapp-lify Physiopy python toolboxes #172

Remi-Gau opened this issue Dec 14, 2022 · 0 comments

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@Remi-Gau
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Remi-Gau commented Dec 14, 2022

Added as an issue for book keeping

Source: https://brainhack.ch/

Team Leaders:

Stefano Moia

Physiopy is a community-driven effort that aims to offer a full data preparation pipeline for non-neural physiological recordings and to build consensus on “best practices” among researchers; all in an open, transparent, and reproducible manner. One of the four pillars of the community is a set of Python toolboxes to analyse and preprocess physiological data and obtain regressors to denoise neuroimaging data.

In this project, we want to maximise the support for the Brain Imaging Data Standard (BIDS) schema. We will obtain this by:

  • create an interface to read data and metadata in BIDS standard
  • reorganise data export to comply with BIDS derivatives
  • compose a Docker recipe to automatically create Docker containers at each toolbox release
  • add boutiques metadata
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