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perf: added caching for Docker images to GitHub action
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‎.github/workflows/ci.yml

+65-55
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@@ -156,62 +156,72 @@ jobs:
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echo "::set-output name=netpyneVersion::${NETPYNE_VERSION}"
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echo "::set-output name=brian2Version::${BRIAN2_VERSION}"
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- name: Build Docker images
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run: |
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REVISION=$(git rev-parse HEAD)
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CREATED=$(date --rfc-3339=seconds | sed 's/ /T/')
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if [ -z "${{ github.event.inputs.simulator }}" ] || [ "${{ github.event.inputs.simulator }}" == "pyneuroml" ]; then
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docker build \
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--label org.opencontainers.image.source=https://github.com/${{ github.repository }} \
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--label org.opencontainers.image.revision=${REVISION} \
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--label org.opencontainers.image.created=${CREATED} \
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--build-arg VERSION=${{ steps.get-version-number.outputs.version }} \
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--build-arg SIMULATOR_VERSION=${{ steps.get-docker-image-tag.outputs.pyneuromlVersion }} \
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--tag ghcr.io/biosimulators/biosimulators_pyneuroml/pyneuroml:${{ steps.get-docker-image-tag.outputs.pyneuromlVersion }} \
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--tag ghcr.io/biosimulators/biosimulators_pyneuroml/pyneuroml:latest \
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-f Dockerfile-pyneuroml \
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.
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fi
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echo "::set-output name=revision::${REVISION}"
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echo "::set-output name=created::${CREATED}"
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if [ -z "${{ github.event.inputs.simulator }}" ] || [ "${{ github.event.inputs.simulator }}" == "neuron" ]; then
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docker build \
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--label org.opencontainers.image.source=https://github.com/${{ github.repository }} \
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--label org.opencontainers.image.revision=${REVISION} \
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--label org.opencontainers.image.created=${CREATED} \
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--build-arg VERSION=${{ steps.get-version-number.outputs.version }} \
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--build-arg SIMULATOR_VERSION=${{ steps.get-docker-image-tag.outputs.neuronVersion }} \
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--tag ghcr.io/biosimulators/biosimulators_pyneuroml/neuron:${{ steps.get-docker-image-tag.outputs.neuronVersion }} \
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--tag ghcr.io/biosimulators/biosimulators_pyneuroml/neuron:latest \
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-f Dockerfile-neuron \
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.
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fi
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if [ -z "${{ github.event.inputs.simulator }}" ] || [ "${{ github.event.inputs.simulator }}" == "netpyne" ]; then
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docker build \
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--label org.opencontainers.image.source=https://github.com/${{ github.repository }} \
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--label org.opencontainers.image.revision=${REVISION} \
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--label org.opencontainers.image.created=${CREATED} \
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--build-arg VERSION=${{ steps.get-version-number.outputs.version }} \
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--build-arg SIMULATOR_VERSION=${{ steps.get-docker-image-tag.outputs.netpyneVersion }} \
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--tag ghcr.io/biosimulators/biosimulators_pyneuroml/netpyne:${{ steps.get-docker-image-tag.outputs.netpyneVersion }} \
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--tag ghcr.io/biosimulators/biosimulators_pyneuroml/netpyne:latest \
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-f Dockerfile-netpyne \
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.
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fi
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if [ -z "${{ github.event.inputs.simulator }}" ] || [ "${{ github.event.inputs.simulator }}" == "brian2" ]; then
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docker build \
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--label org.opencontainers.image.source=https://github.com/${{ github.repository }} \
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--label org.opencontainers.image.revision=${REVISION} \
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--label org.opencontainers.image.created=${CREATED} \
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--build-arg VERSION=${{ steps.get-version-number.outputs.version }} \
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--build-arg SIMULATOR_VERSION=${{ steps.get-docker-image-tag.outputs.brian2Version }} \
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--tag ghcr.io/biosimulators/biosimulators_pyneuroml/brian2:${{ steps.get-docker-image-tag.outputs.brian2Version }} \
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--tag ghcr.io/biosimulators/biosimulators_pyneuroml/brian2:latest \
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-f Dockerfile-brian2 \
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.
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fi
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- name: Build pyNeuroML Docker image
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uses: whoan/docker-build-with-cache-action@v5
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if: github.event.inputs.simulator || github.event.inputs.simulator == 'pyneuroml'
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with:
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dockerfile: Dockerfile-pyneuroml
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build_extra_args: "--compress=true --label org.opencontainers.image.revision=${{steps.get-docker-image-tag.outputs.revision}} --label org.opencontainers.image.created=${{steps.get-docker-image-tag.outputs.created}}"
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registry: ghcr.io
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image_name: biosimulators/biosimulators_pyneuroml/pyneuroml
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image_tag: ${{ github.sha }}
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push_image_and_stages: true
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username: ${{ secrets.DOCKER_REGISTRY_USERNAME }}
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password: "${{ secrets.DOCKER_REGISTRY_TOKEN }}"
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- name: Build NEURON Docker image
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uses: whoan/docker-build-with-cache-action@v5
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if: github.event.inputs.simulator || github.event.inputs.simulator == 'neuron'
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with:
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dockerfile: Dockerfile-neuron
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build_extra_args: "--compress=true --label org.opencontainers.image.revision=${{steps.get-docker-image-tag.outputs.revision}} --label org.opencontainers.image.created=${{steps.get-docker-image-tag.outputs.created}}"
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registry: ghcr.io
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image_name: biosimulators/biosimulators_pyneuroml/neuron
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image_tag: ${{ github.sha }}
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push_image_and_stages: true
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username: ${{ secrets.DOCKER_REGISTRY_USERNAME }}
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password: "${{ secrets.DOCKER_REGISTRY_TOKEN }}"
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- name: Build NetPyNe Docker image
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uses: whoan/docker-build-with-cache-action@v5
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if: github.event.inputs.simulator || github.event.inputs.simulator == 'netpyne'
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with:
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dockerfile: Dockerfile-netpyne
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build_extra_args: "--compress=true --label org.opencontainers.image.revision=${{steps.get-docker-image-tag.outputs.revision}} --label org.opencontainers.image.created=${{steps.get-docker-image-tag.outputs.created}}"
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registry: ghcr.io
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image_name: biosimulators/biosimulators_pyneuroml/netpyne
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image_tag: ${{ github.sha }}
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push_image_and_stages: true
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username: ${{ secrets.DOCKER_REGISTRY_USERNAME }}
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password: "${{ secrets.DOCKER_REGISTRY_TOKEN }}"
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- name: Build Brian 2 Docker image
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uses: whoan/docker-build-with-cache-action@v5
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if: github.event.inputs.simulator || github.event.inputs.simulator == 'brian2'
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with:
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dockerfile: Dockerfile-brian2
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build_extra_args: "--compress=true --label org.opencontainers.image.revision=${{steps.get-docker-image-tag.outputs.revision}} --label org.opencontainers.image.created=${{steps.get-docker-image-tag.outputs.created}}"
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registry: ghcr.io
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image_name: biosimulators/biosimulators_pyneuroml/brian2
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image_tag: ${{ github.sha }}
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push_image_and_stages: true
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username: ${{ secrets.DOCKER_REGISTRY_USERNAME }}
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password: "${{ secrets.DOCKER_REGISTRY_TOKEN }}"
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- name: Label Docker images
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run: |
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docker image label ghcr.io/biosimulators/biosimulators_pyneuroml/pyneuroml:${{ github.sha }} ghcr.io/biosimulators/biosimulators_pyneuroml/pyneuroml:${{ steps.get-docker-image-tag.outputs.pyneuromlVersion }}
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docker image label ghcr.io/biosimulators/biosimulators_pyneuroml/neuron:${{ github.sha }} ghcr.io/biosimulators/biosimulators_pyneuroml/neuron:${{ steps.get-docker-image-tag.outputs.neuronVersion }}
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docker image label ghcr.io/biosimulators/biosimulators_pyneuroml/netpyne:${{ github.sha }} ghcr.io/biosimulators/biosimulators_pyneuroml/netpyne:${{ steps.get-docker-image-tag.outputs.netpyneVersion }}
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docker image label ghcr.io/biosimulators/biosimulators_pyneuroml/brian2:${{ github.sha }} ghcr.io/biosimulators/biosimulators_pyneuroml/brian2:${{ steps.get-docker-image-tag.outputs.brian2Version }}
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docker image label ghcr.io/biosimulators/biosimulators_pyneuroml/pyneuroml:${{ github.sha }} ghcr.io/biosimulators/biosimulators_pyneuroml/pyneuroml:latest
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docker image label ghcr.io/biosimulators/biosimulators_pyneuroml/neuron:${{ github.sha }} ghcr.io/biosimulators/biosimulators_pyneuroml/neuron:latest
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docker image label ghcr.io/biosimulators/biosimulators_pyneuroml/netpyne:${{ github.sha }} ghcr.io/biosimulators/biosimulators_pyneuroml/netpyne:latest
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docker image label ghcr.io/biosimulators/biosimulators_pyneuroml/brian2:${{ github.sha }} ghcr.io/biosimulators/biosimulators_pyneuroml/brian2:latest
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#############################################
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## Test and upload coverage report to Codecov

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