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gtdb
Genome Taxonomy Database
https://gtdb.ecogenomic.org
No response
The Genome Taxonomy Database (GTDB) is an initiative to establish a standardised microbial taxonomy based on genome phylogeny.
CC-BY-SA-4.0
doi:10.1093/nar/gkab776|doi:10.1038/s41564-021-00918-8|doi:10.1038/s41587-020-0501-8|doi:10.1038/nbt.4229
g__Prochlorococcus_A
^[cdfgops]__\w+\S+$
https://gtdb.ecogenomic.org/tree?r=$1
AJ Ireland
ialarmedalien
0000-0003-1982-9065
Donovan Parks
0000-0001-6662-9010
The text was updated successfully, but these errors were encountered:
6374569
thanks @ialarmedalien! your new record is merge in PR #1242. It'll be up with the next weekly re-deploy of the Bioregistry
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Prefix
gtdb
Name
Genome Taxonomy Database
Homepage
https://gtdb.ecogenomic.org
Source Code Repository
No response
Description
The Genome Taxonomy Database (GTDB) is an initiative to establish a standardised microbial taxonomy based on genome phylogeny.
License
CC-BY-SA-4.0
Publications
doi:10.1093/nar/gkab776|doi:10.1038/s41564-021-00918-8|doi:10.1038/s41587-020-0501-8|doi:10.1038/nbt.4229
Example Local Unique Identifier
g__Prochlorococcus_A
Regular Expression Pattern for Local Unique Identifier
^[cdfgops]__\w+\S+$
URI Format String
https://gtdb.ecogenomic.org/tree?r=$1
Wikidata Property
No response
Contributor Name
AJ Ireland
Contributor GitHub
ialarmedalien
Contributor ORCiD
0000-0003-1982-9065
Contributor Email
No response
Contact Name
Donovan Parks
Contact ORCiD
0000-0001-6662-9010
Contact GitHub
No response
Contact Email
No response
Additional Comments
No response
The text was updated successfully, but these errors were encountered: