From d1fd2ca04c19d9ebe393be19f5ac6cd247f296a0 Mon Sep 17 00:00:00 2001 From: biologyguy Date: Fri, 3 Feb 2017 13:08:40 -0500 Subject: [PATCH] Set date and contributions for V1.2.5 --- buddysuite/AlignBuddy.py | 2 +- buddysuite/DatabaseBuddy.py | 2 +- buddysuite/PhyloBuddy.py | 2 +- buddysuite/SeqBuddy.py | 2 +- buddysuite/buddy_resources.py | 2 +- 5 files changed, 5 insertions(+), 5 deletions(-) diff --git a/buddysuite/AlignBuddy.py b/buddysuite/AlignBuddy.py index 66d100d..5e8e467 100755 --- a/buddysuite/AlignBuddy.py +++ b/buddysuite/AlignBuddy.py @@ -70,7 +70,7 @@ # ################################################ GLOBALS ###################################################### # GAP_CHARS = ["-", ".", " "] -VERSION = br.Version("AlignBuddy", 1, "2.5", br.contributors, {"year": 2017, "month": 2, "day": 2}) +VERSION = br.Version("AlignBuddy", 1, "2.5", br.contributors, {"year": 2017, "month": 2, "day": 3}) # #################################################### ALIGNBUDDY #################################################### # diff --git a/buddysuite/DatabaseBuddy.py b/buddysuite/DatabaseBuddy.py index c09c11e..60421ff 100755 --- a/buddysuite/DatabaseBuddy.py +++ b/buddysuite/DatabaseBuddy.py @@ -80,7 +80,7 @@ "fastq-solexa", "fastq-illumina", "genbank", "gb", "imgt", "nexus", "phd", "phylip", "seqxml", "stockholm", "tab", "qual"] CONFIG = br.config_values() -VERSION = br.Version("DatabaseBuddy", 1, "2.5", br.contributors, {"year": 2017, "month": 2, "day": 2}) +VERSION = br.Version("DatabaseBuddy", 1, "2.5", br.contributors, {"year": 2017, "month": 2, "day": 3}) GREY = "\033[90m" RED = "\033[91m" diff --git a/buddysuite/PhyloBuddy.py b/buddysuite/PhyloBuddy.py index b14aa91..739cfd0 100755 --- a/buddysuite/PhyloBuddy.py +++ b/buddysuite/PhyloBuddy.py @@ -147,7 +147,7 @@ def ascending_order(phylobuddy): # ##################################################### GLOBALS ###################################################### # CONFIG = br.config_values() -VERSION = br.Version("PhyloBuddy", 1, "2.5", br.contributors, {"year": 2017, "month": 2, "day": 2}) +VERSION = br.Version("PhyloBuddy", 1, "2.5", br.contributors, {"year": 2017, "month": 2, "day": 3}) OUTPUT_FORMATS = ["newick", "nexus", "nexml"] PHYLO_INFERENCE_TOOLS = ["raxml", "phyml", "fasttree"] diff --git a/buddysuite/SeqBuddy.py b/buddysuite/SeqBuddy.py index 849231a..a6debd4 100755 --- a/buddysuite/SeqBuddy.py +++ b/buddysuite/SeqBuddy.py @@ -157,7 +157,7 @@ def incremental_rename(query, replace): # - Try to speed things up by reading in all sequence data only when necessary # ###################################################### GLOBALS ##################################################### # -VERSION = br.Version("SeqBuddy", 1, "2.5", br.contributors, {"year": 2017, "month": 2, "day": 2}) +VERSION = br.Version("SeqBuddy", 1, "2.5", br.contributors, {"year": 2017, "month": 2, "day": 3}) OUTPUT_FORMATS = ["ids", "accessions", "summary", "full-summary", "clustal", "embl", "fasta", "fastq", "fastq-sanger", "fastq-solexa", "fastq-illumina", "genbank", "gb", "imgt", "nexus", "phd", "phylip", "phylip-relaxed", "phylipss", "phylipsr", "raw", "seqxml", "sff", "stockholm", "tab", "qual"] diff --git a/buddysuite/buddy_resources.py b/buddysuite/buddy_resources.py index 75bebe9..84804c9 100755 --- a/buddysuite/buddy_resources.py +++ b/buddysuite/buddy_resources.py @@ -1370,7 +1370,7 @@ def isfile_override(path): # #################################################### VARIABLES ##################################################### # -contributors = [Contributor("Stephen", "Bond", commits=1023, github="https://github.com/biologyguy"), +contributors = [Contributor("Stephen", "Bond", commits=1033, github="https://github.com/biologyguy"), Contributor("Karl", "Keat", commits=392, github="https://github.com/KarlKeat"), Contributor("Jeremy", "Labarge", commits=26, github="https://github.com/biojerm"), Contributor("Dustin", "Mitchell", commits=12, github="https://github.com/djmitche"),