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@bioinfocz

Laboratory of Genomics and Bioinformatics

Institute of Molecular Genetics of the Czech Academy of Sciences

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  1. scdrake scdrake Public

    A pipeline for droplet-based single-cell RNA-seq and spot-based spatial transcriptomics data secondary analysis implemented in the drake Make-like pipeline toolkit for the R language.

    R 16 3

Repositories

Showing 9 of 9 repositories
  • exp_heatmap Public

    Extended Cross-Population (ExP) Heatmap

    bioinfocz/exp_heatmap’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Feb 25, 2026
  • Course-on-scRNA-seq-data-analysis Public

    Reproduction of SIB course on single cell transcriptomics by mostly using the Seurat pipeline

    bioinfocz/Course-on-scRNA-seq-data-analysis’s past year of commit activity
    HTML 0 CC-BY-4.0 1 0 1 Updated Dec 2, 2025
  • scdrake Public

    A pipeline for droplet-based single-cell RNA-seq and spot-based spatial transcriptomics data secondary analysis implemented in the drake Make-like pipeline toolkit for the R language.

    bioinfocz/scdrake’s past year of commit activity
    R 16 MIT 3 0 0 Updated Aug 27, 2025
  • scTargets Public
    bioinfocz/scTargets’s past year of commit activity
    R 0 0 0 0 Updated May 20, 2025
  • rnamod Public

    Find RNA methylation

    bioinfocz/rnamod’s past year of commit activity
    Python 4 MIT 0 0 0 Updated Dec 3, 2020
  • ComplexHeatmap-intro Public

    ComplexHeatmap introduction

    bioinfocz/ComplexHeatmap-intro’s past year of commit activity
    HTML 2 MIT 0 0 0 Updated Oct 13, 2020
  • Cerebro Public Forked from romanhaa/Cerebro

    Visualization of scRNA-seq data.

    bioinfocz/Cerebro’s past year of commit activity
    C++ 0 MIT 20 0 0 Updated Jan 6, 2020
  • scripts Public

    Some of our scripts which could be useful.

    bioinfocz/scripts’s past year of commit activity
    Nextflow 0 MIT 0 0 0 Updated Nov 1, 2018
  • remove-actions-opennebula Public archive

    Remove scheduled actions from OpenNebula virtual machine.

    bioinfocz/remove-actions-opennebula’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Aug 14, 2018

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