diff --git a/build-fail-blacklist b/build-fail-blacklist index e5f70965ed0be..14b28eda3594d 100644 --- a/build-fail-blacklist +++ b/build-fail-blacklist @@ -195,7 +195,7 @@ recipes/r-coloc recipes/r-dartr recipes/r-data.table recipes/r-dbchip -recipes/r-deconstructsigs +#recipes/r-deconstructsigs recipes/r-deoptimr recipes/r-diptest recipes/r-dpeak diff --git a/recipes/r-deconstructsigs/build.sh b/recipes/r-deconstructsigs/build.sh index 0c37df6e8efec..81250b8ff4aaa 100644 --- a/recipes/r-deconstructsigs/build.sh +++ b/recipes/r-deconstructsigs/build.sh @@ -5,9 +5,3 @@ mv DESCRIPTION DESCRIPTION.old grep -v '^Priority: ' DESCRIPTION.old > DESCRIPTION $R CMD INSTALL --build . - -# Add more build steps here, if they are necessary. - -# See -# http://docs.continuum.io/conda/build.html -# for a list of environment variables that are set during the build process. diff --git a/recipes/r-deconstructsigs/meta.yaml b/recipes/r-deconstructsigs/meta.yaml index 7cd218732e02d..eda4d2f74f2ea 100644 --- a/recipes/r-deconstructsigs/meta.yaml +++ b/recipes/r-deconstructsigs/meta.yaml @@ -1,34 +1,35 @@ -{% set version = '1.8.0' %} +{% set version = '1.8.0.1' %} package: name: r-deconstructsigs version: {{ version|replace("-", "_") }} source: - url: - - https://cran.r-project.org/src/contrib/deconstructSigs_{{ version }}.tar.gz - - https://cran.r-project.org/src/contrib/Archive/deconstructSigs/deconstructSigs_{{ version }}.tar.gz - sha256: 2ab8f6c0fd674bd270035ba2112f1a79d63de1155ba9698c4169c92196059d04 + # Last release version is missing fixes for hg38, pull from GitHub + # https://github.com/raerose01/deconstructSigs/issues/27 + url: https://github.com/raerose01/deconstructSigs/archive/ca3c2f9.tar.gz + # - https://cran.r-project.org/src/contrib/deconstructSigs_{{ version }}.tar.gz + # - https://cran.r-project.org/src/contrib/Archive/deconstructSigs/deconstructSigs_{{ version }}.tar.gz + sha256: 0e31aed3e4428e0026b33e663deee71d9bba81db56a1306e0a81666aa4a0e39d build: - number: 1 + number: 0 rpaths: - lib/R/lib/ - lib/ requirements: host: + - r-base - bioconductor-bsgenome - bioconductor-bsgenome.hsapiens.ucsc.hg19 - bioconductor-genomeinfodb - - r-base - r-reshape2 - run: + - r-base - bioconductor-bsgenome - bioconductor-bsgenome.hsapiens.ucsc.hg19 - bioconductor-genomeinfodb - - r-base - r-reshape2 test: