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meta.yaml
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meta.yaml
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{% set version = "0.22.1" %}
package:
name: pysam
version: '{{ version }}'
source:
url: https://github.com/pysam-developers/pysam/archive/v{{ version }}.tar.gz
sha256: e4981524d7627c53fa0d3f8cbec2bd65c2ea7520092f25e1029af12cb7b82ff6
patches:
- arm_hwcap.patch
build:
number: 2
skip: True # [py2k]
binary_relocation: False # [linux]
run_exports:
- {{ pin_subpackage('pysam', max_pin="x.x") }}
requirements:
build:
- {{ compiler('c') }}
- make
host:
- cython
- python
- setuptools
- zlib
- xz
- bzip2
- libdeflate
- libcurl
- openssl # [not osx]
run:
- python
about:
home: https://github.com/pysam-developers/pysam
license: MIT
summary: "Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix."
extra:
additional-platforms:
- linux-aarch64
- osx-arm64
identifiers:
- biotools:pysam
- doi:10.1093/bioinformatics/btp352