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build_failure.osx-64.yaml
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build_failure.osx-64.yaml
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recipe_sha: 75ceaf6e80509d4e1b7cfa64e61685e0361dc4103d557386ae8a26816f31990e # The hash of the recipe's meta.yaml at which this recipe failed to build.
skiplist: true # Set to true to skiplist this recipe so that it will be ignored as long as its latest commit is the one given above.
log: |-
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/analysis/methcounts.o -MD -MP -MF $depbase.Tpo -c -o src/analysis/methcounts.o ../src/analysis/methcounts.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o methcounts src/analysis/methcounts.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/analysis/bsrate.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/analysis/bsrate.o -MD -MP -MF $depbase.Tpo -c -o src/analysis/bsrate.o ../src/analysis/bsrate.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o bsrate src/analysis/bsrate.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/analysis/hmr.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/analysis/hmr.o -MD -MP -MF $depbase.Tpo -c -o src/analysis/hmr.o ../src/analysis/hmr.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o hmr src/analysis/hmr.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/analysis/hypermr.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/analysis/hypermr.o -MD -MP -MF $depbase.Tpo -c -o src/analysis/hypermr.o ../src/analysis/hypermr.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o hypermr src/analysis/hypermr.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/analysis/levels.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/analysis/levels.o -MD -MP -MF $depbase.Tpo -c -o src/analysis/levels.o ../src/analysis/levels.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o levels src/analysis/levels.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/analysis/roimethstat.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/analysis/roimethstat.o -MD -MP -MF $depbase.Tpo -c -o src/analysis/roimethstat.o ../src/analysis/roimethstat.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o roimethstat src/analysis/roimethstat.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/analysis/methstates.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/analysis/methstates.o -MD -MP -MF $depbase.Tpo -c -o src/analysis/methstates.o ../src/analysis/methstates.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o methstates src/analysis/methstates.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/analysis/methentropy.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/analysis/methentropy.o -MD -MP -MF $depbase.Tpo -c -o src/analysis/methentropy.o ../src/analysis/methentropy.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o methentropy src/analysis/methentropy.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/analysis/hmr_rep.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/analysis/hmr_rep.o -MD -MP -MF $depbase.Tpo -c -o src/analysis/hmr_rep.o ../src/analysis/hmr_rep.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o hmr_rep src/analysis/hmr_rep.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/analysis/multimethstat.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/analysis/multimethstat.o -MD -MP -MF $depbase.Tpo -c -o src/analysis/multimethstat.o ../src/analysis/multimethstat.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o multimethstat src/analysis/multimethstat.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/utils/lc_approx.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/utils/lc_approx.o -MD -MP -MF $depbase.Tpo -c -o src/utils/lc_approx.o ../src/utils/lc_approx.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o lc_approx src/utils/lc_approx.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/utils/fast-liftover.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/utils/fast-liftover.o -MD -MP -MF $depbase.Tpo -c -o src/utils/fast-liftover.o ../src/utils/fast-liftover.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o fast-liftover src/utils/fast-liftover.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/utils/lift-filter.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/utils/lift-filter.o -MD -MP -MF $depbase.Tpo -c -o src/utils/lift-filter.o ../src/utils/lift-filter.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o lift-filter src/utils/lift-filter.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/utils/merge-bsrate.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/utils/merge-bsrate.o -MD -MP -MF $depbase.Tpo -c -o src/utils/merge-bsrate.o ../src/utils/merge-bsrate.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o merge-bsrate src/utils/merge-bsrate.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/utils/merge-methcounts.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/utils/merge-methcounts.o -MD -MP -MF $depbase.Tpo -c -o src/utils/merge-methcounts.o ../src/utils/merge-methcounts.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o merge-methcounts src/utils/merge-methcounts.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/utils/duplicate-remover.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/utils/duplicate-remover.o -MD -MP -MF $depbase.Tpo -c -o src/utils/duplicate-remover.o ../src/utils/duplicate-remover.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o duplicate-remover src/utils/duplicate-remover.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/utils/symmetric-cpgs.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/utils/symmetric-cpgs.o -MD -MP -MF $depbase.Tpo -c -o src/utils/symmetric-cpgs.o ../src/utils/symmetric-cpgs.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o symmetric-cpgs src/utils/symmetric-cpgs.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/utils/clean-hairpins.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/utils/clean-hairpins.o -MD -MP -MF $depbase.Tpo -c -o src/utils/clean-hairpins.o ../src/utils/clean-hairpins.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o clean-hairpins src/utils/clean-hairpins.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/utils/selectsites.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/utils/selectsites.o -MD -MP -MF $depbase.Tpo -c -o src/utils/selectsites.o ../src/utils/selectsites.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o selectsites src/utils/selectsites.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/utils/guessprotocol.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/utils/guessprotocol.o -MD -MP -MF $depbase.Tpo -c -o src/utils/guessprotocol.o ../src/utils/guessprotocol.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o guessprotocol src/utils/guessprotocol.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/utils/format_reads.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/utils/format_reads.o -MD -MP -MF $depbase.Tpo -c -o src/utils/format_reads.o ../src/utils/format_reads.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o format_reads src/utils/format_reads.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/amrfinder/allelicmeth.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/amrfinder/allelicmeth.o -MD -MP -MF $depbase.Tpo -c -o src/amrfinder/allelicmeth.o ../src/amrfinder/allelicmeth.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o allelicmeth src/amrfinder/allelicmeth.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/amrfinder/amrfinder.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/amrfinder/amrfinder.o -MD -MP -MF $depbase.Tpo -c -o src/amrfinder/amrfinder.o ../src/amrfinder/amrfinder.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o amrfinder src/amrfinder/amrfinder.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/amrfinder/amrtester.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/amrfinder/amrtester.o -MD -MP -MF $depbase.Tpo -c -o src/amrfinder/amrtester.o ../src/amrfinder/amrtester.cpp &&\
mv -f $depbase.Tpo $depbase.Po
x86_64-apple-darwin13.4.0-clang -std=c11 -O3 -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib -L$PREFIX/lib -o amrtester src/amrfinder/amrtester.o libmethpipe.a src/smithlab_cpp/libsmithlab_cpp.a -lgsl -lgslcblas -lz -lhts
depbase=echo src/radmeth/radmeth.o | sed 's|[^/]*$|.deps/&|;s|\.o$||';\
x86_64-apple-darwin13.4.0-clang -std=c11 -DHAVE_CONFIG_H -I. -I.. -I ../src/common -I ../src/smithlab_cpp -D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9 -O3 -MT src/radmeth/radmeth.o -MD -MP -MF $depbase.Tpo -c -o src/radmeth/radmeth.o ../src/radmeth/radmeth.cpp &&\
mv -f $depbase.Tpo $depbase.Po
make[2]: Leaving directory '$SRC_DIR/build'
make[1]: Leaving directory '$SRC_DIR/build'
# Last 100 lines of the build log.