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build_failure.linux-64.yaml
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build_failure.linux-64.yaml
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recipe_sha: 686f49bcd245205318d59d6a520044055090f8bfdb5ed23f0ddd8ceb5b88b41e # The commit at which this recipe failed to build.
skiplist: true # Set to true to skiplist this recipe so that it will be ignored as long as its latest commit is the one given above.
reason: |-
ValueError: unsupported format character 'T' (0x54) at index 5523
category: |-
compiler error
log: |-
09:04:38 BIOCONDA INFO (OUT) ERROR: loading failed
09:04:38 BIOCONDA INFO (OUT) * removing ‘/opt/conda/conda-bld/bioconductor-jaspar2022_1702026057787/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/lib/R/library/JASPAR2022’
09:04:38 BIOCONDA INFO (OUT)
09:04:38 BIOCONDA INFO (OUT) return code: 1
09:04:38 BIOCONDA INFO (OUT)
09:04:38 BIOCONDA INFO (OUT) kwargs:
09:04:38 BIOCONDA INFO (OUT) {}
09:04:38 BIOCONDA INFO (OUT)
09:04:38 BIOCONDA INFO (OUT) : <exception str() failed>
09:04:38 BIOCONDA INFO (OUT)
09:04:38 BIOCONDA INFO (OUT) During handling of the above exception, another exception occurred:
09:04:38 BIOCONDA INFO (OUT)
09:04:38 BIOCONDA INFO (OUT) Traceback (most recent call last):
09:04:38 BIOCONDA INFO (OUT) File "/opt/conda/bin/conda-mambabuild", line 10, in <module>
09:04:38 BIOCONDA INFO (OUT) sys.exit(main())
09:04:38 BIOCONDA INFO (OUT) File "/opt/conda/lib/python3.8/site-packages/boa/cli/mambabuild.py", line 256, in main
09:04:38 BIOCONDA INFO (OUT) call_conda_build(action, config)
09:04:38 BIOCONDA INFO (OUT) File "/opt/conda/lib/python3.8/site-packages/boa/cli/mambabuild.py", line 228, in call_conda_build
09:04:38 BIOCONDA INFO (OUT) result = api.build(
09:04:38 BIOCONDA INFO (OUT) File "/opt/conda/lib/python3.8/site-packages/conda_build/api.py", line 180, in build
09:04:38 BIOCONDA INFO (OUT) return build_tree(
09:04:38 BIOCONDA INFO (OUT) File "/opt/conda/lib/python3.8/site-packages/conda_build/build.py", line 3089, in build_tree
09:04:38 BIOCONDA INFO (OUT) test(pkg, config=metadata.config.copy(), stats=stats)
09:04:38 BIOCONDA INFO (OUT) File "/opt/conda/lib/python3.8/site-packages/conda_build/build.py", line 2879, in test
09:04:38 BIOCONDA INFO (OUT) environ.create_env(metadata.config.test_prefix, actions, config=metadata.config,
09:04:38 BIOCONDA INFO (OUT) File "/opt/conda/lib/python3.8/site-packages/conda_build/environ.py", line 1068, in create_env
09:04:38 BIOCONDA INFO (OUT) "too short in" in str(exc)
09:04:38 BIOCONDA INFO (OUT) File "/opt/conda/lib/python3.8/site-packages/conda/__init__.py", line 104, in __str__
09:04:38 BIOCONDA INFO (OUT) return "\n".join(str(e) for e in self.errors) + "\n"
09:04:38 BIOCONDA INFO (OUT) File "/opt/conda/lib/python3.8/site-packages/conda/__init__.py", line 104, in <genexpr>
09:04:38 BIOCONDA INFO (OUT) return "\n".join(str(e) for e in self.errors) + "\n"
09:04:38 BIOCONDA INFO (OUT) File "/opt/conda/lib/python3.8/site-packages/conda/__init__.py", line 58, in __str__
09:04:38 BIOCONDA INFO (OUT) return str(self.message % self._kwargs)
09:04:38 BIOCONDA INFO (OUT) ValueError: unsupported format character 'T' (0x54) at index 5523
09:04:47 BIOCONDA ERROR COMMAND FAILED (exited with 1): docker run -t --net host --rm -v /tmp/tmptio6n346/build_script.bash:/opt/build_script.bash -v /opt/mambaforge/envs/bioconda/conda-bld/:/opt/host-conda-bld -v /home/runner/work/bioconda-recipes/bioconda-recipes/recipes/bioconductor-jaspar2022:/opt/recipe -e LANG=C.UTF-8 -e HOST_USER_ID=1001 quay.io/bioconda/bioconda-utils-build-env-cos7:2.11.0 /bin/bash /opt/build_script.bash