-
Notifications
You must be signed in to change notification settings - Fork 3.3k
/
build_failure.osx-64.yaml
106 lines (100 loc) · 5.4 KB
/
build_failure.osx-64.yaml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
recipe_sha: cd6c654642b58a1ae021676e3516975dbc01a6ba6e27b668bc181e21ad457739 # The commit at which this recipe failed to build.
skiplist: true # Set to true to skiplist this recipe so that it will be ignored as long as its latest commit is the one given above.
category: |-
dependency issue
log: |2-
/opt/mambaforge/envs/bioconda/conda-bld/work
Test:
/opt/mambaforge/envs/bioconda/conda-bld/test_tmp
Leaving build/test environments:
Test:
source activate /opt/mambaforge/envs/bioconda/conda-bld/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla
Build:
source activate /opt/mambaforge/envs/bioconda/conda-bld/_build_env
Traceback (most recent call last):
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/boa/cli/mambabuild.py", line 141, in mamba_get_install_actions
solution = solver.solve_for_action(_specs, prefix)
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/boa/core/solver.py", line 244, in solve_for_action
t = self.solve(specs)
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/boa/core/solver.py", line 234, in solve
raise RuntimeError("Solver could not find solution." error_string)
RuntimeError: Solver could not find solution.Mamba failed to solve:
- r-ggside >=0.2.2
- r-glue
- libblas 3.9.* *netlib
- r-ggplot2 >=3.4.0
- bioconductor-interactionset >=1.30.0,<1.31.0
- r-dplyr >=1.1.1
- liblapack 3.9.* *netlib
- bioconductor-enrichedheatmap >=1.32.0,<1.33.0
- bioconductor-limma >=3.58.0,<3.59.0
- bioconductor-rtracklayer >=1.62.0,<1.63.0
- r-tidyr
- r-ggforce
- bioconductor-genomicranges >=1.54.0,<1.55.0
- bioconductor-genomicinteractions >=1.36.0,<1.37.0
- r-stringr
- r-scales
- r-tidyselect
- r-ggrepel
- r-base 4.3.*
- r-rlang
- bioconductor-iranges >=2.36.0,<2.37.0
- bioconductor-summarizedexperiment >=1.32.0,<1.33.0
- bioconductor-edger >=4.0.0,<4.1.0
- r-vctrs
- r-broom
- r-complexupset
- bioconductor-s4vectors >=0.40.0,<0.41.0
- bioconductor-genomeinfodb >=1.38.0,<1.39.0
- r-matrixstats
- r-patchwork
- bioconductor-csaw >=1.36.0,<1.37.0
- r-forcats
- r-venndiagram
- bioconductor-biocio >=1.12.0,<1.13.0
- bioconductor-gviz >=1.46.0,<1.47.0
- r-rcolorbrewer
- r-tibble
- bioconductor-rsamtools >=2.18.0,<2.19.0
- bioconductor-biocparallel >=1.36.0,<1.37.0
with channels:
- conda-forge
- bioconda
- defaults
The reported errors are:
- Encountered problems while solving:
- - nothing provides requested bioconductor-enrichedheatmap >=1.32.0,<1.33.0
-
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/opt/mambaforge/envs/bioconda/bin/conda-mambabuild", line 10, in <module>
sys.exit(main())
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/boa/cli/mambabuild.py", line 256, in main
call_conda_build(action, config)
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/boa/cli/mambabuild.py", line 228, in call_conda_build
result = api.build(
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/api.py", line 180, in build
return build_tree(
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/build.py", line 3078, in build_tree
packages_from_this = build(metadata, stats,
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/build.py", line 2038, in build
output_metas = expand_outputs([(m, need_source_download, need_reparse_in_env)])
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/render.py", line 787, in expand_outputs
for (output_dict, m) in deepcopy(_m).get_output_metadata_set(permit_unsatisfiable_variants=False):
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/metadata.py", line 2524, in get_output_metadata_set
conda_packages = finalize_outputs_pass(
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/metadata.py", line 884, in finalize_outputs_pass
fm = finalize_metadata(
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/render.py", line 547, in finalize_metadata
build_unsat, host_unsat = add_upstream_pins(m,
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/render.py", line 409, in add_upstream_pins
host_deps, host_unsat, extra_run_specs_from_host = _read_upstream_pin_files(m, 'host',
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/render.py", line 374, in _read_upstream_pin_files
deps, actions, unsat = get_env_dependencies(m, env, m.config.variant,
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/conda_build/render.py", line 131, in get_env_dependencies
actions = environ.get_install_actions(tmpdir, tuple(dependencies), env,
File "/opt/mambaforge/envs/bioconda/lib/python3.8/site-packages/boa/cli/mambabuild.py", line 150, in mamba_get_install_actions
raise err
conda_build.exceptions.DependencyNeedsBuildingError: Unsatisfiable dependencies for platform osx-64: {MatchSpec("bioconductor-enrichedheatmap[version='>=1.32.0,<1.33.0']")}
# Last 100 lines of the build log.