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meta.yaml
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meta.yaml
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{% set name = "quast" %}
{% set version = "5.0.2" %}
{% set hash = "2b31aac010f5c04d5367f1bf718516ae" %}
package:
name: {{ name|lower }}
version: {{ version }}
build:
number: 1
source:
url: http://downloads.sourceforge.net/project/{{ name|lower }}/{{ name|lower }}-{{ version }}.tar.gz
md5: {{ hash }}
patches:
- genemark-issue_disable-and-exclude-from-package.patch
- skip-glimmer-in-test.patch
- remove-explicit-dependencies-from-setup-py.patch
requirements:
build:
- {{ compiler('c') }}
host:
- perl
- python
- setuptools
- matplotlib
- joblib
- simplejson
- blast
- zlib
- glimmerHMM
- circos
run:
- perl
- python
- matplotlib
- openjdk >=8
- joblib
- simplejson
- blast
- zlib
- glimmerHMM
- circos
test:
source_files:
- test_data
commands:
- quast --version
- metaquast --version
about:
home: http://{{ name|lower }}.sourceforge.net/
license: Custom
license_file: LICENSE.txt
summary: Quality Assessment Tool for Genome Assemblies
extra:
notes: |
- GeneMark gene prediction software is disabled due to licensing issues
identifiers:
- biotools:quast