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Request my old files stored in Datahub #6390

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vibha-y opened this issue Oct 19, 2024 · 0 comments
Open

Request my old files stored in Datahub #6390

vibha-y opened this issue Oct 19, 2024 · 0 comments
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data retrieval Tasks focused on retrieving data for users support

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@vibha-y
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vibha-y commented Oct 19, 2024

Your UC Berkeley Email Address

srivibha_yellamraju@berkeley.edu

I need access to my files for HW 3 for BioE 149

Read in the MYELOID counts

Explore the data in /home/jovyan/shared/course/bioe-c149-readwrite/hw3

You should see a file 'Brain_Myeloid-counts.csv'

Add the path to this file in the function below

myeloid_data = scprep.io.load_csv( ## TODO ##,

cell_axis='row', sparse=True).transpose()

NOTE: For future steps, we need the transposed version of the original Myeloid dataset

which is why you see the call .transpose()

Load the Myeloid counts data

I dont see the 'Brain_Myeloid-counts.csv' file in my directory

Link to Your Datahub Folder

gs://ucb-datahub-archived-homedirs/2023-2-summer/datahub/srivibha-5fyellamraju.tar.gz

@vibha-y vibha-y added data retrieval Tasks focused on retrieving data for users support labels Oct 19, 2024
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