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PDBx Parser

enhancementNew feature or requestNew feature or request

hardA major or complex undertakingA major or complex undertaking

medium priorityThe default priority for a new issue.The default priority for a new issue.

Status: Open.

#297 In bebop/poly;

· TimothyStiles opened on Mar 21, 2023

Write more thorough explanation of alignment algorithms in align.go

documentationImprovements or additions to documentationImprovements or additions to documentation

intermediateWill take some time to fixWill take some time to fix

low priorityWould be nice to fix, but doesn't have to happen right now/there are more important thingsWould be nice to fix, but doesn't have to happen right now/there are more important things

stale

Status: Open.

#363 In bebop/poly;

· carreter opened on Sep 23, 2023

Implement LinearFold for prediction of RNA secondary structure

easyA quick and easy fix!A quick and easy fix!

enhancementNew feature or requestNew feature or request

medium priorityThe default priority for a new issue.The default priority for a new issue.

stale

Status: Open.

#361 In bebop/poly;

· carreter opened on Sep 23, 2023

Implement Gibson Assembly

enhancementNew feature or requestNew feature or request

high priorityHigh priority - something is broken or missing that is critical for users or developers.High priority - something is broken or missing that is critical for users or developers.

intermediateWill take some time to fixWill take some time to fix

stale

Status: Open.

#359 In bebop/poly;

· carreter opened on Sep 23, 2023

Create a tutorial series around a real-world, working example

documentationImprovements or additions to documentationImprovements or additions to documentation

hardA major or complex undertakingA major or complex undertaking

high priorityHigh priority - something is broken or missing that is critical for users or developers.High priority - something is broken or missing that is critical for users or developers.

stale

Status: Open.

#362 In bebop/poly;

· carreter opened on Sep 23, 2023

Default codon tables

enhancementNew feature or requestNew feature or request

good first issueGood for newcomersGood for newcomers

help wantedExtra attention is neededExtra attention is needed

intermediateWill take some time to fixWill take some time to fix

low priorityWould be nice to fix, but doesn't have to happen right now/there are more important thingsWould be nice to fix, but doesn't have to happen right now/there are more important things

stale

Status: Open.

#247 In bebop/poly;

· Koeng101 opened on Apr 5, 2022

Failed to parse Saccharomyces cerevisiae S288C chromosome IX

bugSomething isn't workingSomething isn't working

high priorityHigh priority - something is broken or missing that is critical for users or developers.High priority - something is broken or missing that is critical for users or developers.

intermediateWill take some time to fixWill take some time to fix

Status: Open.

#313 In bebop/poly;

· Koeng101 opened on May 29, 2023

slow5 doesn't detect newline

bugSomething isn't workingSomething isn't working

easyA quick and easy fix!A quick and easy fix!

medium priorityThe default priority for a new issue.The default priority for a new issue.

stale

Status: Open.

#327 In bebop/poly;

· Koeng101 opened on Aug 8, 2023

Gff.AddFeature() code is misleading and mutates Feature state

bugSomething isn't workingSomething isn't working

easyA quick and easy fix!A quick and easy fix!

good first issueGood for newcomersGood for newcomers

medium priorityThe default priority for a new issue.The default priority for a new issue.

stale

Status: Open.

#342 In bebop/poly;

· carreter opened on Sep 11, 2023

Feature.GetSequence() always returns a nil error value

bugSomething isn't workingSomething isn't working

easyA quick and easy fix!A quick and easy fix!

good first issueGood for newcomersGood for newcomers

help wantedExtra attention is neededExtra attention is needed

low priorityWould be nice to fix, but doesn't have to happen right now/there are more important thingsWould be nice to fix, but doesn't have to happen right now/there are more important things

stale

Status: Open.

#352 In bebop/poly;

· carreter opened on Sep 20, 2023

Improve and standardize parsing API

enhancementNew feature or requestNew feature or request

hardA major or complex undertakingA major or complex undertaking

high priorityHigh priority - something is broken or missing that is critical for users or developers.High priority - something is broken or missing that is critical for users or developers.

stale

uxIssues with user experience of using the packageIssues with user experience of using the package

Status: Open.

#364 In bebop/poly;

· carreter opened on Sep 23, 2023

Pileup parsing deletion with .

enhancementNew feature or requestNew feature or request

hardA major or complex undertakingA major or complex undertaking

medium priorityThe default priority for a new issue.The default priority for a new issue.

stale

Status: Open.

#355 In bebop/poly;

· Koeng101 opened on Sep 21, 2023