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Biology-centered data-driven quality control for scRNA-seq

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DDQC - data-driven quality control for single cell/nucleus RNA sequencing

Required packages

  1. pegasus

installation

  1. Clone this repository using the following code:

    git clone https://github.com/ayshwaryas/ddqc.git

  2. In the root directory run the following command:

    pip install .

  3. For the usage instructions refer to tutorials/ddqc_tutorial.ipynb

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Biology-centered data-driven quality control for scRNA-seq

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