Axon/Myelin segmentation using Deep Learning

Visualize responses of Google Form CSV export

Axon Segmentation Training Initiative for Histology: A collection of datasets for axon and myelin segmentation in microscopy images.

Pipeline to compare semantic segmentation model output against manual cell counts. We compute Precision, Recall and F-Score

Images and files used for software testing (unit and integration tests).

Repository that contains most figures for axondeepseg documentation.

Axon and myelin segmentation model in histology images to quantify myelination in the human brain. Training data was acquired in the uncinate fasciculus using CARS microscopy.

Myelinated & Unmyelinated Axon Segmentation in Teleost Killifish TEM Images