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setup.py
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setup.py
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from setuptools import setup, find_packages
setup(
name='cytopath',
version='0.2.1',
description='Simulation based inference of differentiation trajectories from RNA velocity fields.',
license='BSD 3-Clause License',
packages=find_packages(),
author = 'Revant Gupta',
author_email = 'revant.gupta.93@gmail.com',
url = 'https://github.com/aron0093/cytopath',
download_url = 'https://github.com/aron0093/cytopath/archive/v_021.tar.gz',
keywords = ['Trajectory Inference', 'single-cell RNA sequencing', 'RNA velocity'],
install_requires=[
'scvelo>=0.1.25',
'numpy==1.23.5',
'joblib',
'fastdtw',
'hausdorff',
'scikit-learn>=1.3.0',
'tqdm',
'numba'
],
classifiers=[
'Development Status :: 4 - Beta',
'Intended Audience :: Science/Research',
'Topic :: Software Development :: Build Tools',
'License :: OSI Approved :: BSD License',
'Programming Language :: Python :: 3.9',
])