[SPARK-33104][BUILD] Exclude 'org.apache.hadoop:hadoop-yarn-server-resourcemanager:jar:tests' #30133

HyukjinKwon · 2020-10-22T15:04:18Z

What changes were proposed in this pull request?

This PR proposes to exclude org.apache.hadoop:hadoop-yarn-server-resourcemanager:jar:tests from hadoop-yarn-server-tests when we use Hadoop 2 profile.

For some reasons, after SBT 1.3 upgrade at SPARK-21708, SBT starts to pull the dependencies of 'hadoop-yarn-server-tests' with 'tests' classifier:

org/apache/hadoop/hadoop-common/2.7.4/hadoop-common-2.7.4-tests.jar
org/apache/hadoop/hadoop-yarn-common/2.7.4/hadoop-yarn-common-2.7.4-tests.jar
org/apache/hadoop/hadoop-yarn-server-resourcemanager/2.7.4/hadoop-yarn-server-resourcemanager-2.7.4-tests.jar

these were not pulled before the upgrade.

This specific hadoop-yarn-server-resourcemanager-2.7.4-tests.jar causes the problem (SPARK-33104)

When the test case creates the Hadoop configuration here,

spark/core/src/main/scala/org/apache/spark/deploy/SparkHadoopUtil.scala

Line 122 in cc06266

val hadoopConf = SparkHadoopUtil.newConfiguration(conf)
Such jars above have higher precedence in the class path, instead of the specified custom core-site.xml in the test:

spark/resource-managers/yarn/src/main/scala/org/apache/spark/deploy/yarn/Client.scala

Line 1375 in e93b8f0

buildPath(Environment.PWD.$$(), LOCALIZED_CONF_DIR, LOCALIZED_HADOOP_CONF_DIR), env)

Later, core-site.xml in the jar is picked instead in Hadoop's Configuration:

Before this fix:

jar:file:/.../https/maven-central.storage-download.googleapis.com/maven2/org/apache/hadoop/
hadoop-yarn-server-resourcemanager/2.7.4/hadoop-yarn-server-resourcemanager-2.7.4-tests.jar!/core-site.xml

After this fix:

file:/.../spark/resource-managers/yarn/target/org.apache.spark.deploy.yarn.YarnClusterSuite/
org.apache.spark.deploy.yarn.YarnClusterSuite-localDir-nm-0_0/
usercache/.../filecache/10/__spark_conf__.zip/__hadoop_conf__/core-site.xml

the core-site.xml in the jar of course does not contain:

spark/resource-managers/yarn/src/test/scala/org/apache/spark/deploy/yarn/YarnClusterSuite.scala

Lines 133 to 141 in 2cfd215

    
               val coreSite = """<?xml version="1.0" encoding="UTF-8"?> 
        
                 |<configuration> 
        
                 |  <property> 
        
                 |    <name>spark.test.key</name> 
        
                 |    <value>testvalue</value> 
        
                 |  </property> 
        
                 |</configuration> 
        
                 |""".stripMargin 
        
               Files.write(coreSite, new File(customConf, "core-site.xml"), StandardCharsets.UTF_8)

and the specific test fails.

This PR uses some kind of hacky approach. It was excluded from 'hadoop-yarn-server-tests' with 'tests' classifier, and then added back as a proper dependency (when Hadoop 2 profile is used). In this way, SBT does not pull hadoop-yarn-server-resourcemanager with tests classifier anymore.

Why are the changes needed?

To make the build pass. This is a blocker.

Does this PR introduce any user-facing change?

No, test-only.

How was this patch tested?

Manually tested and debugged:

build/sbt clean "yarn/testOnly *.YarnClusterSuite -- -z SparkHadoopUtil" -Pyarn -Phadoop-2.7 -Phive -Phive-2.3

HyukjinKwon · 2020-10-22T15:04:41Z

cc @srowen, @dongjoon-hyun and @gemelen

HyukjinKwon · 2020-10-22T15:08:09Z

retest this please

HyukjinKwon · 2020-10-22T15:37:29Z

Thanks @srowen. I'll take a look if there are related test failures tomorrow although logically I think there'd not be because these were not pulled in before.

SparkQA · 2020-10-22T15:47:32Z

Kubernetes integration test starting
URL: https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder-K8s/34771/

dongjoon-hyun · 2020-10-22T15:50:14Z

Thank you so much, @HyukjinKwon !

SparkQA · 2020-10-22T15:55:45Z

Kubernetes integration test starting
URL: https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder-K8s/34772/

dongjoon-hyun

+1, LGTM (Pending Jenkins).
I verified that this fixes SPARK-33104, too.

$ build/sbt "yarn/testOnly *.YarnClusterSuite -- -z SparkHadoopUtil" -Pyarn -Phadoop-2.7 -Phive -Phive-2.3
[info] YarnClusterSuite:
[info] - yarn-cluster should respect conf overrides in SparkHadoopUtil (SPARK-16414, SPARK-23630) (13 seconds, 216 milliseconds)
[info] ScalaTest
[info] Run completed in 31 seconds, 103 milliseconds.
[info] Total number of tests run: 1
[info] Suites: completed 1, aborted 0
[info] Tests: succeeded 1, failed 0, canceled 0, ignored 0, pending 0
[info] All tests passed.
[info] Passed: Total 1, Failed 0, Errors 0, Passed 1
[success] Total time: 131 s (02:11), completed Oct 22, 2020 8:55:10 AM

SparkQA · 2020-10-22T16:08:31Z

Kubernetes integration test status success
URL: https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder-K8s/34771/

SparkQA · 2020-10-22T16:24:28Z

Kubernetes integration test status success
URL: https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder-K8s/34772/

gemelen · 2020-10-22T16:40:10Z

This PR proposes to exclude org.apache.hadoop:hadoop-yarn-server-resourcemanager:jar:tests from hadoop-yarn-server-tests.

For some reasons, after SBT 1.3 upgrade at SPARK-21708, SBT starts to pull the dependencies of 'hadoop-yarn-server-tests' with 'tests' classifier:
org/apache/hadoop/hadoop-common/2.7.4/hadoop-common-2.7.4-tests.jar
org/apache/hadoop/hadoop-yarn-common/2.7.4/hadoop-yarn-common-2.7.4-tests.jar
org/apache/hadoop/hadoop-yarn-server-resourcemanager/2.7.4/hadoop-yarn-server-resourcemanager-2.7.4-tests.jar
these were not pulled before the upgrade.

This sounds exactly as a new behaviour of 'sbt-pom-reader' plugin of latest version. It could be corner case of scope/classifier clash of maven dependency that we are pulling via this plugin.

SparkQA · 2020-10-22T17:11:08Z

Test build #130164 has finished for PR 30133 at commit 4748abd.

This patch fails Spark unit tests.
This patch merges cleanly.
This patch adds no public classes.

dongjoon-hyun · 2020-10-22T17:14:26Z

Retest this please

SparkQA · 2020-10-22T17:33:15Z

Test build #130165 has finished for PR 30133 at commit 4748abd.

This patch fails Spark unit tests.
This patch merges cleanly.
This patch adds no public classes.

SparkQA · 2020-10-22T18:03:06Z

Kubernetes integration test starting
URL: https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder-K8s/34776/

SparkQA · 2020-10-22T18:25:54Z

Kubernetes integration test status success
URL: https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder-K8s/34776/

SparkQA · 2020-10-22T19:26:32Z

Test build #130169 has finished for PR 30133 at commit 4748abd.

This patch fails Spark unit tests.
This patch merges cleanly.
This patch adds no public classes.

dongjoon-hyun · 2020-10-22T20:28:56Z

Retest this please

SparkQA · 2020-10-22T21:22:14Z

Kubernetes integration test starting
URL: https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder-K8s/34782/

SparkQA · 2020-10-22T21:49:52Z

Kubernetes integration test status failure
URL: https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder-K8s/34782/

SparkQA · 2020-10-22T22:40:48Z

Test build #130176 has finished for PR 30133 at commit 4748abd.

This patch fails Spark unit tests.
This patch merges cleanly.
This patch adds no public classes.

sunchao · 2020-10-23T00:16:47Z

It seems the test failure in Yarn is related, although I don't know why yet. Also you may need to update dependency files.

HyukjinKwon · 2020-10-23T00:30:34Z

Will take another look for the test failures.

…parkHadoopUtil`

HyukjinKwon · 2020-10-23T05:51:41Z

The GitHub Actions build looked legitimate. I only excluded this explicitly with Hadoop 2 which should be more correct.
Jenkins build looks just flaky. I already have seen all these features regardless of the current fix.

dongjoon-hyun · 2020-10-23T06:01:54Z

Ya. The additional commit looks better. Let's see the result.

SparkQA · 2020-10-23T06:33:36Z

Kubernetes integration test starting
URL: https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder-K8s/34792/

SparkQA · 2020-10-23T07:02:06Z

Kubernetes integration test status success
URL: https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder-K8s/34792/

viirya · 2020-10-23T07:06:36Z

retest this please

SparkQA · 2020-10-23T07:49:10Z

Kubernetes integration test starting
URL: https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder-K8s/34794/

SparkQA · 2020-10-23T08:17:14Z

Kubernetes integration test status success
URL: https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder-K8s/34794/

SparkQA · 2020-10-23T09:35:21Z

Test build #130193 has finished for PR 30133 at commit 00c8335.

This patch passes all tests.
This patch merges cleanly.
This patch adds no public classes.

HyukjinKwon · 2020-10-23T10:18:23Z

Looks like all tests passed properly. I am going to merge. Thanks all for taking care of this PR.

Merged to master.

dongjoon-hyun · 2020-10-23T15:36:47Z

Thank you!

HyukjinKwon · 2020-10-24T00:42:55Z

Okay .. it finally starts to pass: https://amplab.cs.berkeley.edu/jenkins/job/spark-master-test-sbt-hadoop-2.7-hive-2.3/1454/ 👍

dongjoon-hyun · 2020-11-26T00:14:09Z

Sorry, guys.

The original PR seems to exposes Apache Spark to HADOOP-16080 . We may need to revert this together.

[SPARK-33212][BUILD] Move to shaded clients for Hadoop 3.x profile #29843 (comment) (The regression)

We are searching all options.

The Spark-side workaround
New Hadoop release.
Reverting to the old dependency ([SPARK-33618][CORE] Use hadoop-client instead of hadoop-client-api to make hadoop-aws work #30508)

HyukjinKwon · 2020-11-26T00:16:42Z

Sure, thats fine. Thanks for taking care of this.

HyukjinKwon changed the title ~~[SPARK-33104][BUILD] Exclude 'org.apache.hadoop:hadoop-yarn-server-resourcemanager:jar:tests'~~ [SPARK-33104][BUILD][test-hadoop2.7] Exclude 'org.apache.hadoop:hadoop-yarn-server-resourcemanager:jar:tests' Oct 22, 2020

srowen approved these changes Oct 22, 2020

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dongjoon-hyun approved these changes Oct 22, 2020

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HyukjinKwon marked this pull request as draft October 23, 2020 00:30

HyukjinKwon added 2 commits October 23, 2020 14:36

Fix `YarnClusterSuite.yarn-cluster should respect conf overrides in S…

3838dfe

…parkHadoopUtil`

Narrow down only to Hadoop 2 profile

00c8335

HyukjinKwon force-pushed the SPARK-33104 branch from 4748abd to 00c8335 Compare October 23, 2020 05:49

HyukjinKwon marked this pull request as ready for review October 23, 2020 05:51

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HyukjinKwon changed the title ~~[SPARK-33104][BUILD][test-hadoop2.7] Exclude 'org.apache.hadoop:hadoop-yarn-server-resourcemanager:jar:tests'~~ [SPARK-33104][BUILD] Exclude 'org.apache.hadoop:hadoop-yarn-server-resourcemanager:jar:tests' Oct 23, 2020

HyukjinKwon closed this in 10bd42c Oct 23, 2020

HyukjinKwon deleted the SPARK-33104 branch December 7, 2020 02:05

	val coreSite = """<?xml version="1.0" encoding="UTF-8"?>
	\|<configuration>
	\| <property>
	\| <name>spark.test.key</name>
	\| <value>testvalue</value>
	\| </property>
	\|</configuration>
	\|""".stripMargin
	Files.write(coreSite, new File(customConf, "core-site.xml"), StandardCharsets.UTF_8)

[SPARK-33104][BUILD] Exclude 'org.apache.hadoop:hadoop-yarn-server-resourcemanager:jar:tests' #30133

[SPARK-33104][BUILD] Exclude 'org.apache.hadoop:hadoop-yarn-server-resourcemanager:jar:tests' #30133

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