Merge branch 'master' into takeSample

Author: dorx

assembly/pom.xml

@@ -21,7 +21,7 @@
   <parent>
     <groupId>org.apache.spark</groupId>
     <artifactId>spark-parent</artifactId>
-    <version>1.0.0-SNAPSHOT</version>
+    <version>1.1.0-SNAPSHOT</version>
     <relativePath>../pom.xml</relativePath>
   </parent>
 

bagel/pom.xml

@@ -21,7 +21,7 @@
   <parent>
     <groupId>org.apache.spark</groupId>
     <artifactId>spark-parent</artifactId>
-    <version>1.0.0-SNAPSHOT</version>
+    <version>1.1.0-SNAPSHOT</version>
     <relativePath>../pom.xml</relativePath>
   </parent>
 

bagel/src/test/scala/org/apache/spark/bagel/BagelSuite.scala

@@ -38,8 +38,6 @@ class BagelSuite extends FunSuite with Assertions with BeforeAndAfter with Timeo
       sc.stop()
       sc = null
     }
-    // To avoid Akka rebinding to the same port, since it doesn't unbind immediately on shutdown
-    System.clearProperty("spark.driver.port")
   }
 
   test("halting by voting") {

bin/run-example

@@ -51,7 +51,7 @@ if [[ ! $EXAMPLE_CLASS == org.apache.spark.examples* ]]; then
   EXAMPLE_CLASS="org.apache.spark.examples.$EXAMPLE_CLASS"
 fi
 
-./bin/spark-submit \
+"$FWDIR"/bin/spark-submit \
   --master $EXAMPLE_MASTER \
   --class $EXAMPLE_CLASS \
   "$SPARK_EXAMPLES_JAR" \

core/pom.xml

@@ -21,7 +21,7 @@
   <parent>
     <groupId>org.apache.spark</groupId>
     <artifactId>spark-parent</artifactId>
-    <version>1.0.0-SNAPSHOT</version>
+    <version>1.1.0-SNAPSHOT</version>
     <relativePath>../pom.xml</relativePath>
   </parent>
 
@@ -240,7 +240,7 @@
     </dependency>
     <dependency>
       <groupId>org.easymock</groupId>
-      <artifactId>easymock</artifactId>
+      <artifactId>easymockclassextension</artifactId>
       <scope>test</scope>
     </dependency>
     <dependency>

core/src/main/scala/org/apache/spark/Partitioner.scala

@@ -83,11 +83,17 @@ class HashPartitioner(partitions: Int) extends Partitioner {
     case _ =>
       false
   }
+
+  override def hashCode: Int = numPartitions
 }
 
 /**
  * A [[org.apache.spark.Partitioner]] that partitions sortable records by range into roughly
  * equal ranges. The ranges are determined by sampling the content of the RDD passed in.
+ *
+ * Note that the actual number of partitions created by the RangePartitioner might not be the same
+ * as the `partitions` parameter, in the case where the number of sampled records is less than
+ * the value of `partitions`.
  */
 class RangePartitioner[K : Ordering : ClassTag, V](
     partitions: Int,
@@ -119,7 +125,7 @@ class RangePartitioner[K : Ordering : ClassTag, V](
     }
   }
 
-  def numPartitions = partitions
+  def numPartitions = rangeBounds.length + 1
 
   private val binarySearch: ((Array[K], K) => Int) = CollectionsUtils.makeBinarySearch[K]
 
@@ -155,4 +161,16 @@ class RangePartitioner[K : Ordering : ClassTag, V](
     case _ =>
       false
   }
+
+  override def hashCode(): Int = {
+    val prime = 31
+    var result = 1
+    var i = 0
+    while (i < rangeBounds.length) {
+      result = prime * result + rangeBounds(i).hashCode
+      i += 1
+    }
+    result = prime * result + ascending.hashCode
+    result
+  }
 }

core/src/main/scala/org/apache/spark/SparkContext.scala

@@ -455,7 +455,7 @@ class SparkContext(config: SparkConf) extends Logging {
    */
   def textFile(path: String, minPartitions: Int = defaultMinPartitions): RDD[String] = {
     hadoopFile(path, classOf[TextInputFormat], classOf[LongWritable], classOf[Text],
-      minPartitions).map(pair => pair._2.toString)
+      minPartitions).map(pair => pair._2.toString).setName(path)
   }
 
   /**
@@ -496,7 +496,7 @@ class SparkContext(config: SparkConf) extends Logging {
       classOf[String],
       classOf[String],
       updateConf,
-      minPartitions)
+      minPartitions).setName(path)
   }
 
   /**
@@ -551,7 +551,7 @@ class SparkContext(config: SparkConf) extends Logging {
       inputFormatClass,
       keyClass,
       valueClass,
-      minPartitions)
+      minPartitions).setName(path)
   }
 
   /**
@@ -623,7 +623,7 @@ class SparkContext(config: SparkConf) extends Logging {
     val job = new NewHadoopJob(conf)
     NewFileInputFormat.addInputPath(job, new Path(path))
     val updatedConf = job.getConfiguration
-    new NewHadoopRDD(this, fClass, kClass, vClass, updatedConf)
+    new NewHadoopRDD(this, fClass, kClass, vClass, updatedConf).setName(path)
   }
 
   /**

core/src/main/scala/org/apache/spark/api/java/JavaPairRDD.scala

@@ -672,38 +672,47 @@ class JavaPairRDD[K, V](val rdd: RDD[(K, V)])
 
   /**
    * Return approximate number of distinct values for each key in this RDD.
-   * The accuracy of approximation can be controlled through the relative standard deviation
-   * (relativeSD) parameter, which also controls the amount of memory used. Lower values result in
-   * more accurate counts but increase the memory footprint and vise versa. Uses the provided
-   * Partitioner to partition the output RDD.
+   *
+   * The algorithm used is based on streamlib's implementation of "HyperLogLog in Practice:
+   * Algorithmic Engineering of a State of The Art Cardinality Estimation Algorithm", available
+   * <a href="http://dx.doi.org/10.1145/2452376.2452456">here</a>.
+   *
+   * @param relativeSD Relative accuracy. Smaller values create counters that require more space.
+   *                   It must be greater than 0.000017.
+   * @param partitioner partitioner of the resulting RDD.
    */
-  def countApproxDistinctByKey(relativeSD: Double, partitioner: Partitioner): JavaRDD[(K, Long)] = {
-    rdd.countApproxDistinctByKey(relativeSD, partitioner)
+  def countApproxDistinctByKey(relativeSD: Double, partitioner: Partitioner): JavaPairRDD[K, Long] =
+  {
+    fromRDD(rdd.countApproxDistinctByKey(relativeSD, partitioner))
   }
 
   /**
-   * Return approximate number of distinct values for each key this RDD.
-   * The accuracy of approximation can be controlled through the relative standard deviation
-   * (relativeSD) parameter, which also controls the amount of memory used. Lower values result in
-   * more accurate counts but increase the memory footprint and vise versa. The default value of
-   * relativeSD is 0.05. Hash-partitions the output RDD using the existing partitioner/parallelism
-   * level.
+   * Return approximate number of distinct values for each key in this RDD.
+   *
+   * The algorithm used is based on streamlib's implementation of "HyperLogLog in Practice:
+   * Algorithmic Engineering of a State of The Art Cardinality Estimation Algorithm", available
+   * <a href="http://dx.doi.org/10.1145/2452376.2452456">here</a>.
+   *
+   * @param relativeSD Relative accuracy. Smaller values create counters that require more space.
+   *                   It must be greater than 0.000017.
+   * @param numPartitions number of partitions of the resulting RDD.
    */
-  def countApproxDistinctByKey(relativeSD: Double = 0.05): JavaRDD[(K, Long)] = {
-    rdd.countApproxDistinctByKey(relativeSD)
+  def countApproxDistinctByKey(relativeSD: Double, numPartitions: Int): JavaPairRDD[K, Long] = {
+    fromRDD(rdd.countApproxDistinctByKey(relativeSD, numPartitions))
   }
 
-
   /**
    * Return approximate number of distinct values for each key in this RDD.
-   * The accuracy of approximation can be controlled through the relative standard deviation
-   * (relativeSD) parameter, which also controls the amount of memory used. Lower values result in
-   * more accurate counts but increase the memory footprint and vise versa. HashPartitions the
-   * output RDD into numPartitions.
    *
+   * The algorithm used is based on streamlib's implementation of "HyperLogLog in Practice:
+   * Algorithmic Engineering of a State of The Art Cardinality Estimation Algorithm", available
+   * <a href="http://dx.doi.org/10.1145/2452376.2452456">here</a>.
+   *
+   * @param relativeSD Relative accuracy. Smaller values create counters that require more space.
+   *                   It must be greater than 0.000017.
    */
-  def countApproxDistinctByKey(relativeSD: Double, numPartitions: Int): JavaRDD[(K, Long)] = {
-    rdd.countApproxDistinctByKey(relativeSD, numPartitions)
+  def countApproxDistinctByKey(relativeSD: Double): JavaPairRDD[K, Long] = {
+    fromRDD(rdd.countApproxDistinctByKey(relativeSD))
   }
 
   /** Assign a name to this RDD */

core/src/main/scala/org/apache/spark/api/java/JavaRDD.scala

@@ -108,6 +108,28 @@ class JavaRDD[T](val rdd: RDD[T])(implicit val classTag: ClassTag[T])
   def sample(withReplacement: Boolean, fraction: Double, seed: Long): JavaRDD[T] =
     wrapRDD(rdd.sample(withReplacement, fraction, seed))
 
+
+  /**
+   * Randomly splits this RDD with the provided weights.
+   *
+   * @param weights weights for splits, will be normalized if they don't sum to 1
+   *
+   * @return split RDDs in an array
+   */
+  def randomSplit(weights: Array[Double]): Array[JavaRDD[T]] =
+    randomSplit(weights, Utils.random.nextLong)
+
+  /**
+   * Randomly splits this RDD with the provided weights.
+   *
+   * @param weights weights for splits, will be normalized if they don't sum to 1
+   * @param seed random seed
+   *
+   * @return split RDDs in an array
+   */
+  def randomSplit(weights: Array[Double], seed: Long): Array[JavaRDD[T]] =
+    rdd.randomSplit(weights, seed).map(wrapRDD)
+
   /**
    * Return the union of this RDD and another one. Any identical elements will appear multiple
    * times (use `.distinct()` to eliminate them).

core/src/main/scala/org/apache/spark/api/java/JavaRDDLike.scala

@@ -560,12 +560,14 @@ trait JavaRDDLike[T, This <: JavaRDDLike[T, This]] extends Serializable {
   /**
    * Return approximate number of distinct elements in the RDD.
    *
-   * The accuracy of approximation can be controlled through the relative standard deviation
-   * (relativeSD) parameter, which also controls the amount of memory used. Lower values result in
-   * more accurate counts but increase the memory footprint and vise versa. The default value of
-   * relativeSD is 0.05.
+   * The algorithm used is based on streamlib's implementation of "HyperLogLog in Practice:
+   * Algorithmic Engineering of a State of The Art Cardinality Estimation Algorithm", available
+   * <a href="http://dx.doi.org/10.1145/2452376.2452456">here</a>.
+   *
+   * @param relativeSD Relative accuracy. Smaller values create counters that require more space.
+   *                   It must be greater than 0.000017.
    */
-  def countApproxDistinct(relativeSD: Double = 0.05): Long = rdd.countApproxDistinct(relativeSD)
+  def countApproxDistinct(relativeSD: Double): Long = rdd.countApproxDistinct(relativeSD)
 
   def name(): String = rdd.name
 

core/src/main/scala/org/apache/spark/api/python/PythonPartitioner.scala

@@ -50,4 +50,6 @@ private[spark] class PythonPartitioner(
     case _ =>
       false
   }
+
+  override def hashCode: Int = 31 * numPartitions + pyPartitionFunctionId.hashCode
 }

core/src/main/scala/org/apache/spark/deploy/SparkSubmitArguments.scala

@@ -360,6 +360,9 @@ private[spark] class SparkSubmitArguments(args: Seq[String]) {
         |
         |  --executor-memory MEM       Memory per executor (e.g. 1000M, 2G) (Default: 1G).
         |
+        |  --help, -h                  Show this help message and exit
+        |  --verbose, -v               Print additional debug output
+        |
         | Spark standalone with cluster deploy mode only:
         |  --driver-cores NUM          Cores for driver (Default: 1).
         |  --supervise                 If given, restarts the driver on failure.