HBASE-23222 MOB compaction supportability improvements

busbey · busbey · commit eca4b1f45ec8 · 2019-10-28T10:07:13.000-05:00
* better logging on MOB compaction process * HFileCleanerDelegate to optionally halt removal of mob hfiles * use archiving when removing committed mob file after bulkload ref failure closes #763 Signed-off-by: Wellington Chevreuil <wchevreuil@apache.org> Signed-off-by: Balazs Meszaros <meszibalu@apache.org>
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/mob/ManualMobMaintHFileCleaner.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/mob/ManualMobMaintHFileCleaner.java
@@ -0,0 +1,96 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.hadoop.hbase.mob;
+
+import java.util.concurrent.ConcurrentHashMap;
+import java.util.concurrent.ConcurrentMap;
+
+import org.apache.hadoop.fs.FileStatus;
+import org.apache.hadoop.fs.Path;
+import org.apache.hadoop.hbase.HBaseInterfaceAudience;
+import org.apache.hadoop.hbase.TableName;
+import org.apache.hadoop.hbase.master.cleaner.BaseHFileCleanerDelegate;
+import org.apache.hadoop.hbase.util.FSUtils;
+import org.apache.yetus.audience.InterfaceAudience;
+import org.slf4j.Logger;
+import org.slf4j.LoggerFactory;
+
+/**
+ * {@link BaseHFileCleanerDelegate} that prevents cleaning HFiles from a mob region
+ *
+ * keeps a map of table name strings to mob region name strings over the life of
+ * a JVM instance. if there's churn of unique table names we'll eat memory until
+ * Master restart.
+ */
+@InterfaceAudience.LimitedPrivate(HBaseInterfaceAudience.CONFIG)
+public class ManualMobMaintHFileCleaner extends BaseHFileCleanerDelegate {
+
+  private static final Logger LOG = LoggerFactory.getLogger(ManualMobMaintHFileCleaner.class);
+
+  // We need to avoid making HRegionInfo objects for every table we check.
+  private static final ConcurrentMap<TableName, String> MOB_REGIONS = new ConcurrentHashMap<>();
+
+  @Override
+  public boolean isFileDeletable(FileStatus fStat) {
+    try {
+      // if its a directory, then it can be deleted
+      if (fStat.isDirectory()) {
+        return true;
+      }
+
+      Path file = fStat.getPath();
+
+      // we need the table and region to determine if this is from a mob region
+      // we don't need to worry about hfilelink back references, because the hfilelink cleaner will
+      // retain them.
+      Path family = file.getParent();
+      Path region = family.getParent();
+      Path table = region.getParent();
+
+      TableName tableName = FSUtils.getTableName(table);
+
+      String mobRegion = MOB_REGIONS.get(tableName);
+      if (mobRegion == null) {
+        String tmp = MobUtils.getMobRegionInfo(tableName).getEncodedName();
+        if (tmp == null) {
+          LOG.error("couldn't determine mob region for table {} keeping files just in case.",
+              tableName);
+          return false;
+        }
+        mobRegion = MOB_REGIONS.putIfAbsent(tableName, tmp);
+        // a return of null means that tmp is now in the map for future lookups.
+        if (mobRegion == null) {
+          mobRegion = tmp;
+        }
+        LOG.debug("Had to calculate name of mob region for table {} and it is {}", tableName,
+            mobRegion);
+      }
+
+      boolean ret = !mobRegion.equals(region.getName());
+      if (LOG.isDebugEnabled() && !ret) {
+        LOG.debug("Keeping file '{}' because it is from mob dir", fStat.getPath());
+      }
+      return ret;
+    } catch (RuntimeException e) {
+      LOG.error("Failed to determine mob status of '{}', keeping it just in case.", fStat.getPath(),
+          e);
+      return false;
+    }
+  }
+
+}
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/mob/MobUtils.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/mob/MobUtils.java
@@ -855,11 +855,15 @@ public static void doMobCompaction(Configuration conf, FileSystem fs, TableName
     // with major compaction in mob-enabled column.
     try {
       lock.acquire();
+      LOG.info("start MOB compaction of files for table='{}', column='{}', allFiles={}, " +
+          "compactor='{}'", tableName, hcd.getNameAsString(), allFiles, compactor.getClass());
       compactor.compact(allFiles);
     } catch (Exception e) {
       LOG.error("Failed to compact the mob files for the column " + hcd.getNameAsString()
           + " in the table " + tableName.getNameAsString(), e);
     } finally {
+      LOG.info("end MOB compaction of files for table='{}', column='{}', allFiles={}, " +
+          "compactor='{}'", tableName, hcd.getNameAsString(), allFiles, compactor.getClass());
       lock.release();
     }
   }
diff --git a/hbase-server/src/main/java/org/apache/hadoop/hbase/mob/compactions/PartitionedMobCompactor.java b/hbase-server/src/main/java/org/apache/hadoop/hbase/mob/compactions/PartitionedMobCompactor.java
@@ -305,9 +305,9 @@ protected PartitionedMobCompactionRequest select(List<FileStatus> candidates,
       // all the files are selected
       request.setCompactionType(CompactionType.ALL_FILES);
     }
-    LOG.info("The compaction type is " + request.getCompactionType() + ", the request has "
-      + totalDelFiles + " del files, " + selectedFileCount + " selected files, and "
-      + irrelevantFileCount + " irrelevant files");
+    LOG.info("The compaction type is {}, the request has {} del files, {} selected files, and {} " +
+        "irrelevant files table '{}' and column '{}'", request.getCompactionType(), totalDelFiles,
+        selectedFileCount, irrelevantFileCount, tableName, column.getNameAsString());
     return request;
   }
 
@@ -347,10 +347,12 @@ protected List<Path> performCompaction(PartitionedMobCompactionRequest request)
           totalDelFileCount++;
         }
       }
-      LOG.info("After merging, there are " + totalDelFileCount + " del files");
+      LOG.info("After merging, there are {} del files. table='{}' column='{}'", totalDelFileCount,
+          tableName, column.getNameAsString());
       // compact the mob files by partitions.
       paths = compactMobFiles(request);
-      LOG.info("After compaction, there are " + paths.size() + " mob files");
+      LOG.info("After compaction, there are {} mob files. table='{}' column='{}'", paths.size(),
+          tableName, column.getNameAsString());
     } finally {
       for (CompactionDelPartition delPartition : request.getDelPartitions()) {
         closeStoreFileReaders(delPartition.getStoreFiles());
@@ -359,15 +361,17 @@ protected List<Path> performCompaction(PartitionedMobCompactionRequest request)
 
     // archive the del files if all the mob files are selected.
     if (request.type == CompactionType.ALL_FILES && !request.getDelPartitions().isEmpty()) {
-      LOG.info(
-          "After a mob compaction with all files selected, archiving the del files ");
+      LOG.info("After a mob compaction with all files selected, archiving the del files for " +
+          "table='{}' and column='{}'", tableName, column.getNameAsString());
       for (CompactionDelPartition delPartition : request.getDelPartitions()) {
         LOG.info(Objects.toString(delPartition.listDelFiles()));
         try {
           MobUtils.removeMobFiles(conf, fs, tableName, mobTableDir, column.getName(),
             delPartition.getStoreFiles());
         } catch (IOException e) {
-          LOG.error("Failed to archive the del files " + delPartition.getStoreFiles(), e);
+          LOG.error("Failed to archive the del files {} for partition {} table='{}' and " +
+              "column='{}'", delPartition.getStoreFiles(), delPartition.getId(), tableName,
+              column.getNameAsString(), e);
         }
       }
     }
@@ -461,7 +465,8 @@ protected List<Path> compactMobFiles(final PartitionedMobCompactionRequest reque
       throws IOException {
     Collection<CompactionPartition> partitions = request.compactionPartitions;
     if (partitions == null || partitions.isEmpty()) {
-      LOG.info("No partitions of mob files");
+      LOG.info("No partitions of mob files in table='{}' and column='{}'", tableName,
+          column.getNameAsString());
       return Collections.emptyList();
     }
     List<Path> paths = new ArrayList<>();
@@ -483,7 +488,8 @@ protected List<Path> compactMobFiles(final PartitionedMobCompactionRequest reque
         results.put(partition.getPartitionId(), pool.submit(new Callable<List<Path>>() {
           @Override
           public List<Path> call() throws Exception {
-            LOG.info("Compacting mob files for partition " + partition.getPartitionId());
+            LOG.info("Compacting mob files for partition {} for table='{}' and column='{}'",
+                partition.getPartitionId(), tableName, column.getNameAsString());
             return compactMobFilePartition(request, partition, delFiles, c, table);
           }
         }));
@@ -495,13 +501,15 @@ public List<Path> call() throws Exception {
           paths.addAll(result.getValue().get());
         } catch (Exception e) {
           // just log the error
-          LOG.error("Failed to compact the partition " + result.getKey(), e);
+          LOG.error("Failed to compact the partition {} for table='{}' and column='{}'",
+              result.getKey(), tableName, column.getNameAsString(), e);
           failedPartitions.add(result.getKey());
         }
       }
       if (!failedPartitions.isEmpty()) {
         // if any partition fails in the compaction, directly throw an exception.
-        throw new IOException("Failed to compact the partitions " + failedPartitions);
+        throw new IOException("Failed to compact the partitions " + failedPartitions +
+            " for table='" + tableName + "' column='" + column.getNameAsString() + "'");
       }
     } finally {
       try {
@@ -567,8 +575,9 @@ private List<Path> compactMobFilePartition(PartitionedMobCompactionRequest reque
       // move to the next batch.
       offset += batch;
     }
-    LOG.info("Compaction is finished. The number of mob files is changed from " + files.size()
-      + " to " + newFiles.size());
+    LOG.info("Compaction is finished. The number of mob files is changed from {} to {} for " +
+        "partition={} for table='{}' and column='{}'", files.size(), newFiles.size(),
+        partition.getPartitionId(), tableName, column.getNameAsString());
     return newFiles;
   }
 
@@ -675,8 +684,12 @@ private void compactMobFilesInBatch(PartitionedMobCompactionRequest request,
         cleanupTmpMobFile = false;
         cleanupCommittedMobFile = true;
         // bulkload the ref file
+        LOG.info("start MOB ref bulkload for partition {} table='{}' column='{}'",
+            partition.getPartitionId(), tableName, column.getNameAsString());
         bulkloadRefFile(connection, table, bulkloadPathOfPartition, filePath.getName());
         cleanupCommittedMobFile = false;
+        LOG.info("end MOB ref bulkload for partition {} table='{}' column='{}'",
+            partition.getPartitionId(), tableName, column.getNameAsString());
         newFiles.add(new Path(mobFamilyDir, filePath.getName()));
       }
 
@@ -703,7 +716,11 @@ private void compactMobFilesInBatch(PartitionedMobCompactionRequest request,
       }
 
       if (cleanupCommittedMobFile) {
-        deletePath(new Path(mobFamilyDir, filePath.getName()));
+        LOG.error("failed MOB ref bulkload for partition {} table='{}' column='{}'",
+            partition.getPartitionId(), tableName, column.getNameAsString());
+        MobUtils.removeMobFiles(conf, fs, tableName, mobTableDir, column.getName(),
+            Collections.singletonList(new HStoreFile(fs, new Path(mobFamilyDir, filePath.getName()),
+            conf, compactionCacheConfig, BloomType.NONE, true)));
       }
     }
   }
@@ -904,6 +921,7 @@ private Pair<Long, Long> getFileInfo(List<HStoreFile> storeFiles) throws IOExcep
    * @param path The path of the file to be deleted.
    */
   private void deletePath(Path path) {
+    LOG.debug("Cleanup, delete path '{}'", path);
     try {
       if (path != null) {
         fs.delete(path, true);
diff --git a/hbase-server/src/test/java/org/apache/hadoop/hbase/master/cleaner/TestHFileCleaner.java b/hbase-server/src/test/java/org/apache/hadoop/hbase/master/cleaner/TestHFileCleaner.java
@@ -34,14 +34,19 @@
 import org.apache.hadoop.hbase.HBaseClassTestRule;
 import org.apache.hadoop.hbase.HBaseTestingUtility;
 import org.apache.hadoop.hbase.HConstants;
+import org.apache.hadoop.hbase.HRegionInfo;
 import org.apache.hadoop.hbase.Server;
 import org.apache.hadoop.hbase.ServerName;
+import org.apache.hadoop.hbase.TableName;
 import org.apache.hadoop.hbase.client.ClusterConnection;
 import org.apache.hadoop.hbase.client.Connection;
+import org.apache.hadoop.hbase.mob.ManualMobMaintHFileCleaner;
+import org.apache.hadoop.hbase.mob.MobUtils;
 import org.apache.hadoop.hbase.testclassification.MasterTests;
 import org.apache.hadoop.hbase.testclassification.MediumTests;
 import org.apache.hadoop.hbase.util.EnvironmentEdge;
 import org.apache.hadoop.hbase.util.EnvironmentEdgeManager;
+import org.apache.hadoop.hbase.util.HFileArchiveUtil;
 import org.apache.hadoop.hbase.zookeeper.MetaTableLocator;
 import org.apache.hadoop.hbase.zookeeper.ZKWatcher;
 import org.junit.AfterClass;
@@ -97,6 +102,44 @@ public void testTTLCleaner() throws IOException, InterruptedException {
         + " with create time:" + createTime, cleaner.isFileDeletable(fs.getFileStatus(file)));
   }
 
+  @Test
+  public void testManualMobCleanerStopsMobRemoval() throws IOException {
+    FileSystem fs = UTIL.getDFSCluster().getFileSystem();
+    Path root = UTIL.getDataTestDirOnTestFS();
+    TableName table = TableName.valueOf("testManualMobCleanerStopsMobRemoval");
+    Path mob = HFileArchiveUtil.getRegionArchiveDir(root, table,
+        MobUtils.getMobRegionInfo(table).getEncodedName());
+    Path family= new Path(mob, "family");
+
+    Path file = new Path(family, "someHFileThatWouldBeAUUID");
+    fs.createNewFile(file);
+    assertTrue("Test file not created!", fs.exists(file));
+
+    ManualMobMaintHFileCleaner cleaner = new ManualMobMaintHFileCleaner();
+
+    assertFalse("Mob File shouldn't have been deletable. check path. '"+file+"'",
+        cleaner.isFileDeletable(fs.getFileStatus(file)));
+  }
+
+  @Test
+  public void testManualMobCleanerLetsNonMobGo() throws IOException {
+    FileSystem fs = UTIL.getDFSCluster().getFileSystem();
+    Path root = UTIL.getDataTestDirOnTestFS();
+    TableName table = TableName.valueOf("testManualMobCleanerLetsNonMobGo");
+    Path nonmob = HFileArchiveUtil.getRegionArchiveDir(root, table,
+        new HRegionInfo(table).getEncodedName());
+    Path family= new Path(nonmob, "family");
+
+    Path file = new Path(family, "someHFileThatWouldBeAUUID");
+    fs.createNewFile(file);
+    assertTrue("Test file not created!", fs.exists(file));
+
+    ManualMobMaintHFileCleaner cleaner = new ManualMobMaintHFileCleaner();
+
+    assertTrue("Non-Mob File should have been deletable. check path. '"+file+"'",
+        cleaner.isFileDeletable(fs.getFileStatus(file)));
+  }
+
   /**
    * @param file to check
    * @return loggable information about the file
@@ -115,7 +158,8 @@ public void testHFileCleaning() throws Exception {
     // set TTL
     long ttl = 2000;
     conf.set(HFileCleaner.MASTER_HFILE_CLEANER_PLUGINS,
-      "org.apache.hadoop.hbase.master.cleaner.TimeToLiveHFileCleaner");
+        "org.apache.hadoop.hbase.master.cleaner.TimeToLiveHFileCleaner," +
+        "org.apache.hadoop.hbase.mob.ManualMobMaintHFileCleaner");
     conf.setLong(TimeToLiveHFileCleaner.TTL_CONF_KEY, ttl);
     Server server = new DummyServer();
     Path archivedHfileDir =
diff --git a/hbase-server/src/test/resources/log4j.properties b/hbase-server/src/test/resources/log4j.properties
@@ -58,6 +58,8 @@ log4j.logger.org.apache.hadoop=WARN
 log4j.logger.org.apache.zookeeper=ERROR
 log4j.logger.org.apache.hadoop.hbase=DEBUG
 
+log4j.logger.org.apache.hadoop.hbase.mob.ManualMobMaintHFileCleaner=DEBUG
+
 #These settings are workarounds against spurious logs from the minicluster.
 #See HBASE-4709
 log4j.logger.org.apache.hadoop.metrics2.impl.MetricsConfig=WARN
