fixed: the disk size multiplier to avoid write error: No space left on device error

Author: anand-imcm

workflows/tasks/align_hifi.wdl

@@ -12,7 +12,7 @@ task AlignHifiReads {
     }  
 
     String log_level = "DEBUG"
-    Int disk_size_gb = ceil(size([hifi_reads_fastq_gz, pbmm2_index], "GB")) * 2
+    Int disk_size_gb = ceil(size([hifi_reads_fastq_gz, pbmm2_index], "GB")) * 3
 
     command <<<
         set -euo pipefail

workflows/tasks/call_structural_variants.wdl

@@ -12,7 +12,7 @@ task CallStructuralVariants {
         Int cpu = 16
     }
 
-    Int disk_size_gb = ceil(size([raw_hifi_to_reference_alignment_bam, genome_reference], "GB")) * 2
+    Int disk_size_gb = ceil(size([raw_hifi_to_reference_alignment_bam, genome_reference], "GB")) * 3
 
     command <<<
         set -euo pipefail

workflows/tasks/call_variants.wdl

@@ -13,7 +13,7 @@ task CallVariants {
         Int cpu = 16
     }  
 
-    Int disk_size_gb = ceil(size([raw_hifi_to_reference_alignment_bam, genome_reference], "GB")) * 2
+    Int disk_size_gb = ceil(size([raw_hifi_to_reference_alignment_bam, genome_reference], "GB")) * 3
 
     command <<<
         set -euo pipefail

workflows/tasks/generate_summary.wdl

@@ -16,7 +16,7 @@ task Summary {
         Int cpu = 16
     }
 
-    Int disk_size_gb = ceil(size([vcf, vcfSV, raw_hifi_to_reference_alignment_log], "GB")) * 2
+    Int disk_size_gb = ceil(size([vcf, vcfSV, raw_hifi_to_reference_alignment_log], "GB")) * 3
 
     command <<<
         set -euo pipefail

workflows/tasks/phase_variants.wdl

@@ -13,7 +13,7 @@ task PhaseVariants {
         Int cpu = 16
     }  
 
-    Int disk_size_gb = ceil(size([vcf, bam, genome_reference], "GB")) * 2
+    Int disk_size_gb = ceil(size([vcf, bam, genome_reference], "GB")) * 3
 
     command <<<
         set -euo pipefail