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Introduction

Welcome to the wiki pages for the cBioPortal project.

These wiki pages include all the steps necessary for configuring, building, and deploying a local instance of the cBioPortal. For details on contributing code changes and pull-requests to cBioPortal, please see our CONTRIBUTING Doc.

We also maintain an active list of RFCs (Requests for Comments) where we describe new features and solicit community feedback.

Steps to Build cBioPortal from Source

• Step 1: System Requirements
• Step 2: Pre-Build Steps
• Step 3: Build From Source
• Step 4: Import the Seed Database
• Step 5: Load a Sample Cancer Study
• Step 6: Deploying the Web Application

Reference Pages

• Customizing your instance of cBioPortal
• portal.properties Reference
• File Formats
• Importer Tool
• User Authorization
• Authenticating Users via SAML
• [cBioPortal ER Diagram](cBioPortal ER Diagram)

Downloads

• Downloads

RFCs

• RFC Template
• RFC1: Multiple Transcripts in cBioPortal
• RFC2: Landscape View
• RFC3: Genome Nexus
• RFC4: cBioPortal Sessions
• RFC5: Dynamic Z-Score Calculation
• RFC6: Architecture Refactoring