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49 Open 186 Closed
49 Open 186 Closed
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Issues list

[DEVELOPMENT] Consider using a KNN to construct the intial graph methodology Building functional & diverse pipeline
#337 opened Nov 9, 2023 by quantumjot
[FEATURE REQUEST] Add citation.cff to repo enhancement New feature or request
#336 opened Oct 31, 2023 by mooniean
[DEVELOPMENT] Compare IoU of inference datasets across multiple runs methodology Building functional & diverse pipeline
#334 opened Oct 25, 2023 by KristinaUlicna
@KristinaUlicna
[DEVELOPMENT] Inject uncorrelated Gaussian noise into images methodology Building functional & diverse pipeline
#325 opened Oct 18, 2023 by KristinaUlicna Merge `dev` -> `main`
@KristinaUlicna
[FEATURE REQUEST] Contribute a README.md describing augmentations documentation Improvements or additions to documentation
#324 opened Oct 18, 2023 by KristinaUlicna toml setup for pypi
@chris-soelistyo
Write a CONTRIBUTING.md doc 📝 documentation Improvements or additions to documentation good first issue Good for newcomers
#323 opened Oct 17, 2023 by KristinaUlicna toml setup for pypi
@aldenc @KristinaUlicna
[DEVELOPMENT] Consider config validation to be a property of config methodology Building functional & diverse pipeline
#322 opened Oct 13, 2023 by KristinaUlicna toml setup for pypi
[DEVELOPMENT] Create a function which strips the graph attributes from the GRACE files methodology Building functional & diverse pipeline
#321 opened Oct 13, 2023 by KristinaUlicna Merge `dev` -> `main`
@KristinaUlicna
Re-implement graph / patch augmentation into the training loop
#320 opened Oct 13, 2023 by KristinaUlicna
@chris-soelistyo
[FEATURE REQUEST] Allow user to specify control which / how many edge properties they want enhancement New feature or request
#319 opened Oct 13, 2023 by KristinaUlicna Merge `dev` -> `main`
@KristinaUlicna
[DEVELOPMENT] Consider implementing an RGCN methodology Building functional & diverse pipeline
#305 opened Oct 12, 2023 by KristinaUlicna
Write up an extended abstract for introducing GRACE documentation Improvements or additions to documentation help wanted Extra attention is needed
#301 opened Oct 12, 2023 by KristinaUlicna
@mooniean
1
[DEVELOPMENT] Click options to overwrite config file hyperparameter specification methodology Building functional & diverse pipeline
#298 opened Oct 11, 2023 by KristinaUlicna
@marjanfamili @KristinaUlicna
[DEVELOPMENT] Implement BatchNorm before/after GCN layers enhancement New feature or request methodology Building functional & diverse pipeline
#280 opened Oct 2, 2023 by KristinaUlicna
[DEVELOPMENT] Consider splitting all classifier options into individual torch.nn.Module objects methodology Building functional & diverse pipeline
#279 opened Sep 29, 2023 by KristinaUlicna
[BUG] Introduce timeout on poor models which struggle to project TSNE manifold bug Something isn't working enhancement New feature or request
#272 opened Sep 28, 2023 by KristinaUlicna
@mooniean
Separate training from inference in run.py
#270 opened Sep 28, 2023 by KristinaUlicna toml setup for pypi
[FEATURE REQUEST] Consider removing assume_annotations_from_dummy_predictions function if not needed documentation Improvements or additions to documentation duplicate This issue or pull request already exists
#265 opened Sep 25, 2023 by KristinaUlicna
@KristinaUlicna
[BUG] Add cvxopt to napari env yaml bug Something isn't working setup Installation & environment requirements
#264 opened Sep 25, 2023 by mooniean
@mooniean
[FEATURE REQUEST] Project the TSNE manifold & save out the visualisation from run.py enhancement New feature or request
#262 opened Sep 22, 2023 by KristinaUlicna
[FEATURE REQUEST] Implement loss weighing by class enhancement New feature or request
#260 opened Sep 22, 2023 by KristinaUlicna
[FEATURE REQUEST] Consider replacing seaborn confusion matrices by ConfusionMatrixDisplay visualisation Visualise the data I/O, training progress or properties
#259 opened Sep 22, 2023 by KristinaUlicna Merge `dev` -> `main`
Write a complete set of tests for inference, manifold & optimisation part of the pipeline tests Automated testing for stable main branch
#233 opened Sep 12, 2023 by KristinaUlicna toml setup for pypi
Consider using pydantic for configuration
#215 opened Sep 6, 2023 by quantumjot
Why are we padding the corner images if they don't contribute to training? help wanted Extra attention is needed question Further information is requested
#203 opened Sep 4, 2023 by KristinaUlicna
@chris-soelistyo
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