Search results

[BUG] My output directory don't have motif enrichment result tsv

bugSomething isn't workingSomething isn't working

Status: Open.

#610 In aertslab/pySCENIC;

· Fugwaaaa opened on Mar 30, 2025

[BUG] pyscenic grn errors: Resource temporarily unavailable & empty intersection

bugSomething isn't workingSomething isn't working

Status: Open.

#609 In aertslab/pySCENIC;

· radiasso opened on Mar 18, 2025

Empty Outputs

Status: Open.

#608 In aertslab/pySCENIC;

· rayajallad opened on Mar 7, 2025

[BUG]

bugSomething isn't workingSomething isn't working

Status: Open.

#607 In aertslab/pySCENIC;

· wuxiangning opened on Feb 25, 2025

WARNING: infer_data failed for target HSPA13' Retry (1/10). Failure caused by AttributeError("'csc_matrix' object has no attribute 'A'").

bugSomething isn't workingSomething isn't working

Status: Open.

#605 In aertslab/pySCENIC;

· CampingOnSeabed opened on Feb 17, 2025

broken link

Status: Open.

#604 In aertslab/pySCENIC;

· ChrisSteel-bio opened on Feb 13, 2025

Empty DataFrame Columns: [(Enrichment, AUC), (Enrichment, NES), (Enrichment, MotifSimilarityQvalue), (Enrichment, OrthologousIdentity), (Enrichment, Annotation), (Enrichment, Context), (Enrichment, TargetGenes), (Enrichment, RankAtMax)]

bugSomething isn't workingSomething isn't working

Status: Open.

#603 In aertslab/pySCENIC;

· juhi-ku opened on Feb 13, 2025

[BUG] problem with binarization not detecting bimodal correctly

bugSomething isn't workingSomething isn't working

Status: Open.

#601 In aertslab/pySCENIC;

· Sirin24 opened on Jan 26, 2025

[BUG] Non-transcription factor gene “Fgf15” found in mm_mgi_tfs.txt

bugSomething isn't workingSomething isn't working

Status: Open.

#600 In aertslab/pySCENIC;

· Ashone1992 opened on Jan 18, 2025

t-sne interpretation

questionFurther information is requestedFurther information is requested

Status: Open.

#599 In aertslab/pySCENIC;

· robertzeibich opened on Jan 9, 2025

t-sne on binary regulon activity

questionFurther information is requestedFurther information is requested

Status: Open.

#598 In aertslab/pySCENIC;

· robertzeibich opened on Jan 9, 2025

[BUG]ERROR - Expression matrix should be provided in the loom file format.

bugSomething isn't workingSomething isn't working

Status: Open.

#597 In aertslab/pySCENIC;

· huangtao-china opened on Dec 16, 2024