Merge pull request #48 from aberHRML/devel

v1.0.2

Author: jasenfinch

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: assignments
 Title: Molecular Formula Assignment For High Resolution ESI-MS Based Metabolomics Data
-Version: 1.0.1
+Version: 1.0.2
 Authors@R: person("Jasen", "Finch", email = "jsf9@aber.ac.uk", role = c("aut", "cre"))
 Description: A molecular formula assignment approach for electrospray ionisation high resolution mass spectrometry based metabolomics data.
 Depends: R (>= 3.5.0),

NEWS.md

@@ -1,3 +1,7 @@
+# assignments 1.0.2
+
+* add a fix for an error caused by a breaking change in [`tidygraph`](https://tidygraph.data-imaginist.com/index.html) v1.3.0.
+
 # assignments 1.0.1
 
 * The default ppm threshold has been reduced to 4.

R/components.R

@@ -45,8 +45,15 @@ clean <- function(graph,adduct_rules_table){
   }
 
   if (length(cleaned_graph) > 0){
-    cleaned_graph <- cleaned_graph %>% 
-      bind_graphs() 
+    bound_graphs <- tbl_graph()
+    for (graph in cleaned_graph) {
+      bound_graphs <- bind_graphs(
+        bound_graphs,
+        graph
+      )
+    }
+    
+    cleaned_graph <- bound_graphs
   }
 
   return(cleaned_graph)