Get_params2.Rd

% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/simulation_functions.R
\name{Get_params2}
\alias{Get_params2}
\title{Getting the parameters for simulating gene expression from EVf and gene effects}
\usage{
Get_params2(gene_effects, evf, bimod, ranges)
}
\arguments{
\item{gene_effects}{a list of three matrices (generated using the GeneEffects function), 
each corresponding to one kinetic parameter. Each matrix has nevf columns, and ngenes rows.}

\item{evf}{a vector of length nevf, the cell specific extrinsic variation factor}

\item{bimod}{the bimodality constant}

\item{param_realdata}{the fitted parameter distribution to sample from}
}
\value{
params a matrix of ngenes * 3
}
\description{
This function takes gene_effect and EVF, take their dot product and scale the product to the correct range 
by using first a logistic function and then adding/dividing by constant to their correct range
}
\examples{
Get_params()
}