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@YeoLab

Yeo lab at UCSD

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  1. flotilla flotilla Public

    Reproducible machine learning analysis of gene expression and alternative splicing data

    Jupyter Notebook 126 25

  2. single-cell-bioinformatics single-cell-bioinformatics Public archive

    Course material in notebook format for learning about single cell bioinformatics methods

    Jupyter Notebook 102 38

  3. bento-tools bento-tools Public

    A Python toolkit for subcellular analysis of spatial transcriptomics data

    Python 79 7

  4. clipper clipper Public

    A tool to identify CLIP-seq peaks

    Python 68 43

  5. outrigger outrigger Public

    Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data

    Python 65 22

  6. sailor sailor Public archive

    CWL+Singularity implementation of an RNA editing workflow

    Jupyter Notebook 39 11

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