Skip to content

Latest commit

 

History

History
33 lines (23 loc) · 1.09 KB

index.md

File metadata and controls

33 lines (23 loc) · 1.09 KB
Raw

Muhammad Arif's BB2490 Individual Diary

Table of contents

  1. 2017-11-28
  2. 2017-11-29
  3. 2017-11-30
  4. 2017-12-02

Diary

2017-12-02:

Starting the data pre-processing. All codes were implemented in Python with the help of Pandas module for data manipulation.

As the result: a clean count file, with 87 samples and ~4000 genes (will be filtered more for only protein coding genes)

2017-11-30:

Group meeting to kick off the work: We decided that everyone will take part in the quality control and data normalization to be able to understand the data better

2017-11-29:

Preparing libraries for the data analysis, for discussion tomorrow with the group:

  • Gene To Transcript data
  • Gene Length data (for calculating normalized count)

2017-11-28:

First entry of the diary! We had our first group meeting at KTH Library at 14.00 today. Several things was discussed:

  • Overview about the project
  • Overview of the data
  • Discussion about the expected timeline
  • Preparation for first seminar presentation