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1. CITE-seq_optimization CITE-seq_optimization Public

   Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments

   R 9 2

2. scutility scutility Public

   Utility functions for scRNA-seq focused on ECCITE-seq analysis

   R 3

3. scvdj scvdj Public

   Package for analyzing VDJ (T-/B-cell receptor) clones in single-cell data

   R 3

4. fcutility fcutility Public

   Utility functions for working with Flow Cytometry data in R

   R

5. scfeaturerank scfeaturerank Public

   Feature Rank plot for single-cell analysis (developed for evaluation of (EC)CITE-seq optimizations).

   R

6. multisce multisce Public

   Package for loading and separating multiple (alternative) experiments into smaller elements to provide more flexibility in loading and saving large highly multi-modal datasets

   R