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Starred repositories

5 stars written in Java
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Stirling-Tools / Stirling-PDF

#1 Locally hosted web application that allows you to perform various operations on PDF files

Java 48,523 3,973 Updated Jan 4, 2025

jlegewie / zotfile

Zotero plugin to manage your attachments: automatically rename, move, and attach PDFs (or other files) to Zotero items, sync PDFs from your Zotero library to your (mobile) PDF reader (e.g. an iPad,…

Java 4,086 285 Updated Apr 16, 2024

broadinstitute / gatk

Official code repository for GATK versions 4 and up

Java 1,743 596 Updated Jan 2, 2025

igvteam / igv

Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

Java 650 387 Updated Jan 5, 2025

s-andrews / FastQC

A quality control analysis tool for high throughput sequencing data

Java 465 86 Updated Jan 10, 2024

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