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CMakeLists.txt
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FIND_PACKAGE( SWIG REQUIRED )
IF( SWIG_FOUND )
# adjust paths
SET( SBOL_RELEASE_DIR ${SBOL_RELEASE_DIR}/wrapper )
SET( EXECUTABLE_OUTPUT_PATH ${SBOL_RELEASE_DIR} )
SET( LIBRARY_OUTPUT_PATH ${SBOL_RELEASE_DIR} )
set( CMAKE_SWIG_OUTDIR ${SBOL_RELEASE_DIR} )
# set up some SWIG stuff
include( ${SWIG_USE_FILE} )
set( CMAKE_SWIG_FLAGS "-c++" )
set_source_files_properties(libsbol.i PROPERTIES CPLUSPLUS ON)
if(SBOL_BUILD_STATIC)
add_definitions(-DLIBXML_STATIC -DRAPTOR_STATIC -DLIBXSLT_STATIC -DCURL_STATIC -DCURL_STATICLIB)
endif()
include_directories(
${SBOL_SOURCE_DIR}
${RAPTOR_INCLUDE_DIR}
${CURL_INCLUDE_DIR}
# ${LIBXSLT_INCLUDE_DIR}
# ${LIBXML2_INCLUDE_DIR}
# ${LIBZ_INCLUDE_DIR}
# ${LIBXSLT_EXSLT_INCLUDE_DIR}
# ${LIBICONV_INCLUDE_DIR}
# ${LDAP_INCLUDE_DIR}
)
#get_property(dirs DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} PROPERTY INCLUDE_DIRECTORIES)
#foreach(dir ${dirs})
#message(STATUS "dir='${dir}'")
#endforeach()
# gather source files
FILE( GLOB SBOL_SOURCE_FILES
${SBOL_SOURCE_DIR}/*.h
${SBOL_SOURCE_DIR}/*.cpp )
#get_directory_property( DirDefs COMPILE_DEFINITIONS )
#message( "COMPILE_DEFINITIONS = ${DirDefs}" )
IF (SBOL_BUILD_PYTHON3)
find_package( PythonLibs 3 )
message( "FOUND PYTHON = ${PYTHONLIBS_FOUND} at ${PYTHON_LIBRARIES}")
message( "PYTHON INCLUDE DIRS = ${PYTHON_INCLUDE_DIRS}")
message( "FOUND PYTHON VERSION ${PYTHONLIBS_VERSION_STRING}")
INCLUDE_DIRECTORIES( ${PYTHON_INCLUDE_DIRS} )
if (${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
###### Python 3 for Mac 32x ######
if (SBOL_BUILD_32)
set(PYSBOL_TARGET_DIR "Mac_32_3/sbol")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11 -m32")
# build the SWIG wrapper
swig_add_module( libsbol32_3
python
libsbol.i )
# Do not link in the Python libraries on MacOSX....
swig_link_libraries( libsbol32_3
sbol32
${RAPTOR_LIBRARY}
${CURL_LIBRARY}
${LIBXSLT_LIBRARIES}
# ${SECURITY} ${CORE_FOUNDATION} ${LDAP}
# ${LIBXML2_LIBRARIES}
# ${zlib}
# ${iconv}
)
# ...rather, resolve Python symbols dynamically due to differing runtime env
set_target_properties(_libsbol32_3 PROPERTIES LINK_FLAGS "-undefined dynamic_lookup")
# Move target to a new directory and rename it, so the SWIG libraries can be directly copied into the pySBOL project
set_target_properties(_libsbol32_3 PROPERTIES OUTPUT_NAME "${PYSBOL_TARGET_DIR}/_libsbol")
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/test)
add_custom_command(TARGET _libsbol32_3 PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/test ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol32_3 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/__init__.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/__init__.py)
add_custom_command(TARGET _libsbol32_3 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/sbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol.py)
add_custom_command(TARGET _libsbol32_3 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/CRISPR_example.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/CRISPR_example.py)
add_custom_command(TARGET _libsbol32_3 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/unit_tests.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/unit_tests.py)
add_custom_command(TARGET _libsbol32_3 PRE_BUILD
COMMAND cp ${CMAKE_SWIG_OUTDIR}/libsbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/libsbol.py)
add_custom_command(TARGET _libsbol32_3 POST_BUILD
COMMAND mv ${CMAKE_SWIG_OUTDIR}/libsbol* ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
endif()
##### Python 3 for Mac 64x ######
if(SBOL_BUILD_64)
set(PYSBOL_TARGET_DIR "Mac_64_3/sbol")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11 -m64")
# build the SWIG wrapper
swig_add_module( libsbol64_3
python
libsbol.i )
# Do not link in the Python libraries on MacOSX....
swig_link_libraries( libsbol64_3
sbol64
${RAPTOR_LIBRARY}
${CURL_LIBRARY}
${LIBXSLT_LIBRARIES}
)
# ...rather, resolve Python symbols dynamically due to differing runtime env
set_target_properties(_libsbol64_3 PROPERTIES LINK_FLAGS "-undefined dynamic_lookup")
# Move target to a new directory and rename it, so the SWIG libraries can be directly copied into the pySBOL project
set_target_properties(_libsbol64_3 PROPERTIES OUTPUT_NAME "${PYSBOL_TARGET_DIR}/_libsbol")
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/test)
add_custom_command(TARGET _libsbol64_3 PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/test ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol64_3 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/__init__.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/__init__.py)
add_custom_command(TARGET _libsbol64_3 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/sbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol.py)
add_custom_command(TARGET _libsbol64_3 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/CRISPR_example.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/CRISPR_example.py)
add_custom_command(TARGET _libsbol64_3 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/unit_tests.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/unit_tests.py)
add_custom_command(TARGET _libsbol64_3 PRE_BUILD
COMMAND cp ${CMAKE_SWIG_OUTDIR}/libsbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/libsbol.py)
add_custom_command(TARGET _libsbol64_3 POST_BUILD
COMMAND mv ${CMAKE_SWIG_OUTDIR}/libsbol* ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
endif()
elseif(${CMAKE_SYSTEM_NAME} MATCHES "Linux")
##### Python 3 for Linux 32x #####
if (SBOL_BUILD_32)
set(PYSBOL_TARGET_DIR "python/sbol")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11 -m32")
# build the SWIG wrapper
swig_add_module( libsbol32_3
python
libsbol.i )
# Do not link in the Python libraries on Linux....
swig_link_libraries( libsbol32_3
sbol32
${RAPTOR_LIBRARY}
${CURL_LIBRARY}
${LIBXSLT_LIBRARIES}
)
# ...rather, resolve Python symbols dynamically due to differing runtime env
#set_target_properties(_libsbol32_3 PROPERTIES LINK_FLAGS "-undefined dynamic_lookup")
# Move target to a new directory and rename it, so the SWIG libraries can be directly copied into the pySBOL project
file(MAKE_DIRECTORY "${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}")
file(MAKE_DIRECTORY "${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/test")
set_target_properties(_libsbol32_3 PROPERTIES OUTPUT_NAME "${PYSBOL_TARGET_DIR}/_libsbol")
add_custom_command(TARGET _libsbol32_3 PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/__init__.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol32_3 PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/CRISPR_example.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol32_3 PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/sbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol32_3 PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/unit_tests.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol32_3 PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/test/* ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/test)
add_custom_command(TARGET _libsbol32_3 POST_BUILD
COMMAND cp -r ${CMAKE_SWIG_OUTDIR}/libsbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol32_3 POST_BUILD
COMMAND cp -r ${CMAKE_SWIG_OUTDIR}/libsbol* ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
endif()
##### Python 3 for Linux 64x #####
if(SBOL_BUILD_64)
set(PYSBOL_TARGET_DIR "python/sbol")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11 -m64")
# build the SWIG wrapper
swig_add_module( libsbol64_3
python
libsbol.i )
# Do not link in the Python libraries on Linux....
swig_link_libraries( libsbol64_3
sbol64
${RAPTOR_LIBRARY}
${CURL_LIBRARY}
${LIBXSLT_LIBRARIES}
)
# ...rather, resolve Python symbols dynamically due to differing runtime env
#set_target_properties(_libsbol64_3 PROPERTIES LINK_FLAGS "-undefined dynamic_lookup")
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/test)
set_target_properties(_libsbol64_3 PROPERTIES OUTPUT_NAME "${PYSBOL_TARGET_DIR}/_libsbol")
add_custom_command(TARGET _libsbol64_3 PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/__init__.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol64_3 PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/CRISPR_example.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol64_3 PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/sbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol64_3 PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/unit_tests.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol64_3 PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/test/* ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/test)
add_custom_command(TARGET _libsbol64_3 POST_BUILD
COMMAND cp -r ${CMAKE_SWIG_OUTDIR}/libsbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol64_3 POST_BUILD
COMMAND cp -r ${CMAKE_SWIG_OUTDIR}/libsbol* ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
endif()
else()
##### Python 3 for Windows 32x #####
include_directories( ${JSONCPP_INCLUDE_DIR}/..)
include_directories( ${CURL_INCLUDE_DIR}/..)
if (SBOL_BUILD_32)
set(PYSBOL_TARGET_DIR "Win_32_3")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11 -m32")
swig_add_module( libsbol
python
libsbol.i )
swig_link_libraries( libsbol
${raptor2}
${PYTHON_LIBRARIES}
${curl}
${xml2}
${zlib}
${iconv}
${jsoncpp}
${LIBXSLT_LIBRARIES}
sbol32)
file(MAKE_DIRECTORY "${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}")
set_target_properties(_libsbol PROPERTIES OUTPUT_NAME "${PYSBOL_TARGET_DIR}/sbol/_libsbol")
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/__init__.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/__init__.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/sbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/sbol.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/CRISPR_example.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/CRISPR_example.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/unit_tests.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/unit_tests.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy_directory ${CMAKE_CURRENT_SOURCE_DIR}/test ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/test)
add_custom_command(TARGET _libsbol POST_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_SWIG_OUTDIR}/libsbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/libsbol.py)
add_custom_command(TARGET _libsbol POST_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_SWIG_OUTDIR}/Release/_libsbol.pyd ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/_libsbol.pyd)
endif()
##### Python 3 for Windows 64x #####
if (SBOL_BUILD_64)
set(PYSBOL_TARGET_DIR "Win_64_3")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11 -m64")
swig_add_module( libsbol
python
libsbol.i )
swig_link_libraries( libsbol
${raptor2}
${PYTHON_LIBRARIES}
${curl}
${xml2}
${zlib}
${iconv}
${jsoncpp}
${LIBXSLT_LIBRARIES}
sbol64)
file(MAKE_DIRECTORY "${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}")
set_target_properties(_libsbol PROPERTIES OUTPUT_NAME "${PYSBOL_TARGET_DIR}/sbol/_libsbol")
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/__init__.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/__init__.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/sbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/sbol.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/CRISPR_example.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/CRISPR_example.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/unit_tests.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/unit_tests.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy_directory ${CMAKE_CURRENT_SOURCE_DIR}/test ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/test)
add_custom_command(TARGET _libsbol POST_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_SWIG_OUTDIR}/libsbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/libsbol.py)
add_custom_command(TARGET _libsbol POST_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_SWIG_OUTDIR}/Release/_libsbol.pyd ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/_libsbol.pyd)
endif()
endif()
endif()
unset( PYTHON_LIBRARIES CACHE )
unset( PYTHONLIBS_FOUND CACHE )
unset(PYTHON_INCLUDE_DIRS CACHE )
unset(PYTHON_INCLUDE_DIR CACHE )
unset(PYTHONLIBS_VERSION_STRING CACHE )
unset(PYTHON_INCLUDE_PATH CACHE)
unset( PYTHON_LIBRARIES )
unset( PYTHONLIBS_FOUND )
unset(PYTHON_INCLUDE_DIRS )
unset(PYTHON_INCLUDE_DIR )
unset(PYTHONLIBS_VERSION_STRING )
unset(PYTHON_INCLUDE_PATH )
IF (SBOL_BUILD_PYTHON2)
find_package( PythonLibs 2 EXACT)
message( "FOUND PYTHON = ${PYTHONLIBS_FOUND} at ${PYTHON_LIBRARIES}")
message( "PYTHON INCLUDE DIRS = ${PYTHON_INCLUDE_DIRS}")
message( "FOUND PYTHON VERSION ${PYTHONLIBS_VERSION_STRING}")
INCLUDE_DIRECTORIES( ${PYTHON_INCLUDE_DIRS} )
if (${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
##### Python 2 wrappers for Mac 32x #####
if (SBOL_BUILD_32)
set(PYSBOL_TARGET_DIR "Mac_32_2/sbol")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11 -m32")
# build the SWIG wrapper
swig_add_module( libsbol32_2
python
libsbol.i )
# Do not link in the Python libraries on MacOSX....
swig_link_libraries( libsbol32_2
sbol32
${RAPTOR_LIBRARY}
${CURL_LIBRARY}
${LIBXSLT_LIBRARIES}
)
### ...rather, resolve Python symbols dynamically due to differing runtime env
set_target_properties(_libsbol32_2 PROPERTIES LINK_FLAGS "-undefined dynamic_lookup")
### Move target to a new directory and rename it, so the SWIG libraries can be directly copied into the pySBOL project
set_target_properties(_libsbol32_2 PROPERTIES OUTPUT_NAME "${PYSBOL_TARGET_DIR}/_libsbol")
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/test)
add_custom_command(TARGET _libsbol32_2 PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/test ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol32_2 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/__init__.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/__init__.py)
add_custom_command(TARGET _libsbol32_2 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/sbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol.py)
add_custom_command(TARGET _libsbol32_2 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/CRISPR_example.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/CRISPR_example.py)
add_custom_command(TARGET _libsbol32_2 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/unit_tests.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/unit_tests.py)
add_custom_command(TARGET _libsbol32_2 PRE_BUILD
COMMAND cp ${CMAKE_SWIG_OUTDIR}/libsbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/libsbol.py)
add_custom_command(TARGET _libsbol32_2 POST_BUILD
COMMAND mv ${CMAKE_SWIG_OUTDIR}/libsbol* ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
endif()
##### Python 2 for Mac 64x ######
if(SBOL_BUILD_64)
set(PYSBOL_TARGET_DIR "Mac_64_2/sbol")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11 -m64")
# build the SWIG wrapper
swig_add_module( libsbol64_2
python
libsbol.i )
# Do not link in the Python libraries on MacOSX....
swig_link_libraries( libsbol64_2
sbol64
${RAPTOR_LIBRARY}
${CURL_LIBRARY}
${LIBXSLT_LIBRARIES}
)
# ...rather, resolve Python symbols dynamically due to differing runtime env
set_target_properties(_libsbol64_2 PROPERTIES LINK_FLAGS "-undefined dynamic_lookup")
### Move target to a new directory and rename it, so the SWIG libraries can be directly copied into the pySBOL project
set_target_properties(_libsbol64_2 PROPERTIES OUTPUT_NAME "${PYSBOL_TARGET_DIR}/_libsbol")
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/test)
add_custom_command(TARGET _libsbol64_2 PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/test ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol64_2 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/__init__.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/__init__.py)
add_custom_command(TARGET _libsbol64_2 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/sbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol.py)
add_custom_command(TARGET _libsbol64_2 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/CRISPR_example.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/CRISPR_example.py)
add_custom_command(TARGET _libsbol64_2 PRE_BUILD
COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/unit_tests.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/unit_tests.py)
add_custom_command(TARGET _libsbol64_2 PRE_BUILD
COMMAND cp ${CMAKE_SWIG_OUTDIR}/libsbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/libsbol.py)
add_custom_command(TARGET _libsbol64_2 POST_BUILD
COMMAND mv ${CMAKE_SWIG_OUTDIR}/libsbol* ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
endif()
elseif(${CMAKE_SYSTEM_NAME} MATCHES "Linux")
##### Python 2 for Linux 32x ######
if (SBOL_BUILD_32)
set(PYSBOL_TARGET_DIR "python/sbol")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11 -m32")
swig_add_module( libsbol
python
libsbol.i )
swig_link_libraries( libsbol
${PYTHON_LIBRARIES}
${CURL_LIBRARY}
${LIBXSLT_LIBRARIES}
sbol32)
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/test)
set_target_properties(_libsbol PROPERTIES OUTPUT_NAME "${PYSBOL_TARGET_DIR}/_libsbol")
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/__init__.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/CRISPR_example.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/sbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/unit_tests.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/test/* ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/test)
add_custom_command(TARGET _libsbol POST_BUILD
COMMAND cp -r ${CMAKE_SWIG_OUTDIR}/libsbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol POST_BUILD
COMMAND cp -r ${CMAKE_SWIG_OUTDIR}/libsbol* ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
endif()
##### Python 2 for Linux 64x ######
if (SBOL_BUILD_64)
set(PYSBOL_TARGET_DIR "python/sbol")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11 -m64")
swig_add_module( libsbol
python
libsbol.i )
swig_link_libraries( libsbol
${PYTHON_LIBRARIES}
${CURL_LIBRARY}
${LIBXSLT_LIBRARIES}
sbol64)
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/test)
set_target_properties(_libsbol PROPERTIES OUTPUT_NAME "${PYSBOL_TARGET_DIR}/_libsbol")
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/__init__.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/CRISPR_example.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/sbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/unit_tests.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND cp -r ${CMAKE_CURRENT_SOURCE_DIR}/test/* ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/test)
add_custom_command(TARGET _libsbol POST_BUILD
COMMAND cp -r ${CMAKE_SWIG_OUTDIR}/libsbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol POST_BUILD
COMMAND cp -r ${CMAKE_SWIG_OUTDIR}/libsbol* ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
endif()
else()
##### Python 2 for Win 32x ######
include_directories( ${JSONCPP_INCLUDE_DIR}/..)
include_directories( ${CURL_INCLUDE_DIR}/..)
if (SBOL_BUILD_32)
set(PYSBOL_TARGET_DIR "Win_32_2")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11 -m32")
swig_add_module( libsbol
python
libsbol.i )
swig_link_libraries( libsbol
${raptor2}
${PYTHON_LIBRARIES}
${curl}
${xml2}
${zlib}
${iconv}
${jsoncpp}
${LIBXSLT_LIBRARIES}
sbol32)
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/__init__.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/__init__.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/sbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/sbol.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/CRISPR_example.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/CRISPR_example.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/unit_tests.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/unit_tests.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy_directory ${CMAKE_CURRENT_SOURCE_DIR}/test ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/test)
add_custom_command(TARGET _libsbol POST_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_SWIG_OUTDIR}/libsbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/libsbol.py)
add_custom_command(TARGET _libsbol POST_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_SWIG_OUTDIR}/Release/_libsbol.pyd ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/_libsbol.pyd)
endif()
##### Python 2 for Win 64x ######
if (SBOL_BUILD_64)
set(PYSBOL_TARGET_DIR "Win_64_2")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11 -m64")
swig_add_module( libsbol
python
libsbol.i )
swig_link_libraries( libsbol
${raptor2}
${PYTHON_LIBRARIES}
${curl}
${xml2}
${zlib}
${iconv}
${jsoncpp}
${LIBXSLT_LIBRARIES}
sbol64)
file(MAKE_DIRECTORY ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR})
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/__init__.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/__init__.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/sbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/sbol.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/CRISPR_example.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/CRISPR_example.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/unit_tests.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/unit_tests.py)
add_custom_command(TARGET _libsbol PRE_BUILD
COMMAND ${CMAKE_COMMAND} -E copy_directory ${CMAKE_CURRENT_SOURCE_DIR}/test ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/test)
add_custom_command(TARGET _libsbol POST_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_SWIG_OUTDIR}/libsbol.py ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/libsbol.py)
add_custom_command(TARGET _libsbol POST_BUILD
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_SWIG_OUTDIR}/Release/_libsbol.pyd ${CMAKE_SWIG_OUTDIR}/${PYSBOL_TARGET_DIR}/sbol/_libsbol.pyd)
endif()
endif()
endif()
#install(TARGETS _libsbol DESTINATION lib)
ELSE()
MESSAGE( "SWIG not found; unable to generate Python bindings" )
ENDIF()